Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CYP2C61P-201ENST00000604072 290 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 MIR5739-201ENST00000619803 80 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
HMGB4Q8WW32 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGB4Q8WW32 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 SNORD42.2-201ENST00000365570 69 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 RNU6-1032P-201ENST00000384100 107 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 MIR29B2-201ENST00000385055 81 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 SNORA12.2-201ENST00000391040 156 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 RPS26P42-201ENST00000413485 326 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AC112220.1-201ENST00000434628 355 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 OR2AQ1P-201ENST00000451972 200 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 MIR2053-201ENST00000459295 91 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AC145146.1-201ENST00000496370 254 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 RNU6-1170P-201ENST00000515974 106 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 RNU6-264P-201ENST00000517134 104 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 RN7SKP40-201ENST00000517211 242 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 7SK.7-201ENST00000603504 247 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AL080274.1-201ENST00000605565 220 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AC137590.2-201ENST00000619709 240 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AC022140.2-201ENST00000623500 188 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 AC090517.3-201ENST00000625170 141 ntBASIC2.68□□□□□ -1.98
HMGB4Q8WW32 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HMGB4Q8WW32 RNU6-1115P-201ENST00000362490 106 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 RNU6-490P-201ENST00000362985 107 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 RNU4-76P-201ENST00000364509 141 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 U8.10-201ENST00000384260 133 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 MIR95-201ENST00000385072 81 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 MIR181B1-201ENST00000385240 110 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 RNA5SP492-201ENST00000411330 114 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 HMGB3P2-201ENST00000411913 584 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 AC003685.2-201ENST00000422795 395 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 MTCO3P29-201ENST00000432119 779 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.639-201ENST00000458981 102 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 YWHAEP4-201ENST00000505390 198 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 ANXA2P1-201ENST00000505539 926 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 RNU7-175P-201ENST00000515915 61 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 AP002770.2-201ENST00000543613 532 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 SNORD53-201ENST00000579969 78 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 RMST_6.1-201ENST00000611980 203 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 PCGEM1.1-201ENST00000613431 131 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 AC064859.1-201ENST00000624741 174 ntBASIC2.67□□□□□ -1.98
HMGB4Q8WW32 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGB4Q8WW32 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.197-201ENST00000364004 102 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.405-201ENST00000383979 100 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.451-201ENST00000384200 100 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.463-201ENST00000384271 102 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 RNU6-378P-201ENST00000384324 107 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 RNU6-1274P-201ENST00000384557 107 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.524-201ENST00000384564 100 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 Y_RNA.561-201ENST00000384694 100 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 RNU6-700P-201ENST00000391043 107 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 SNORA46.1-201ENST00000391069 153 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 MIR208B-201ENST00000401172 77 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 MTCYBP10-201ENST00000424905 650 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 AL121890.1-201ENST00000435457 205 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 RNA5SP24-201ENST00000516478 95 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 RNU6-586P-201ENST00000517265 104 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 AL138963.2-201ENST00000605137 226 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 AC090971.5-201ENST00000621102 293 ntBASIC2.66□□□□□ -1.98
HMGB4Q8WW32 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
HMGB4Q8WW32 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HMGB4Q8WW32 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HMGB4Q8WW32 MIR369-201ENST00000362155 70 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms