Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC097463.2-201ENST00000421074 142 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 AL731563.1-201ENST00000442202 214 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX53Q86TM3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 MIR4765-201ENST00000585007 77 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 MIR7106-201ENST00000612419 65 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 uc_338.25-201ENST00000613756 156 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 AC011476.5-201ENST00000615594 130 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 AC130454.1-201ENST00000622948 401 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX53Q86TM3 AL137790.1-201ENST00000634283 177 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 MIR7153-201ENST00000637758 57 ntBASIC3.38□□□□□ -1.87
DDX53Q86TM3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX53Q86TM3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX53Q86TM3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX53Q86TM3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 RNU6-926P-201ENST00000384075 107 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 RNU6-281P-201ENST00000384212 103 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 RNU6-611P-201ENST00000384276 104 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 SNORD78.2-201ENST00000391076 69 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 CBX3P9-201ENST00000402326 552 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 RN7SKP220-201ENST00000410611 288 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 RPL23AP70-201ENST00000483361 460 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX53Q86TM3 RNU2-53P-201ENST00000516257 147 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 RNU6-1012P-201ENST00000516606 109 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 IGHV3-76-201ENST00000522465 295 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 AC093023.1-201ENST00000547375 507 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 AC240442.1-201ENST00000616055 283 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 MIR8062-201ENST00000621515 85 ntBASIC3.37□□□□□ -1.87
DDX53Q86TM3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX53Q86TM3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX53Q86TM3 Y_RNA.183-201ENST00000363882 113 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 SNORA71.1-201ENST00000364523 117 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 Y_RNA.401-201ENST00000383965 117 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 RNU6-378P-201ENST00000384324 107 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 SNORD15B-201ENST00000384714 146 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 RNU6-1001P-201ENST00000411265 100 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 CST9LP2-201ENST00000437612 320 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 AC025750.2-201ENST00000442609 450 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 RPL31P41-201ENST00000477967 372 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 RNA5SP54-201ENST00000516951 92 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 MIR4659A-201ENST00000580269 81 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 MIR3671-201ENST00000580455 88 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX53Q86TM3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 AC093010.3-201ENST00000570269 15214 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX53Q86TM3 ZNF204P-201ENST00000416749 2397 ntBASIC3.36□□□□□ -1.87
DDX53Q86TM3 RNU4-15P-201ENST00000362613 141 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 RNU6-873P-201ENST00000363833 107 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 SNORA54-201ENST00000384281 123 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 PCNPP5-201ENST00000452246 481 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 LINC01399-202ENST00000458450 244 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 AC023824.2-201ENST00000566185 400 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 AC078899.3-201ENST00000599065 212 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 AC006006.1-201ENST00000603082 144 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 AC107871.2-201ENST00000612894 502 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 AC005520.5-201ENST00000613926 164 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.35□□□□□ -1.87
DDX53Q86TM3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX53Q86TM3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.35□□□□□ -1.87
DDX53Q86TM3 OR56A5-201ENST00000340110 738 ntBASIC3.34□□□□□ -1.87
DDX53Q86TM3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms