Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC096649.2-201ENST00000416186 393 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.49□□□□□ -1.85
E4F1Q66K89 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.49□□□□□ -1.85
E4F1Q66K89 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.49□□□□□ -1.85
E4F1Q66K89 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.49□□□□□ -1.85
E4F1Q66K89 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.49□□□□□ -1.85
E4F1Q66K89 RNU4-71P-201ENST00000516258 113 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 Y_RNA.683-201ENST00000516508 93 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 SNORA31.21-201ENST00000517180 77 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 RNU1-45P-201ENST00000517191 141 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.49□□□□□ -1.85
E4F1Q66K89 AK6P2-201ENST00000549020 471 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 RRN3P3-201ENST00000549207 578 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 AC025281.1-201ENST00000567026 265 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 MIR3923-201ENST00000579521 83 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 AL034555.1-201ENST00000604816 211 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 CR392039.5-201ENST00000623201 510 ntBASIC3.49□□□□□ -1.85
E4F1Q66K89 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
E4F1Q66K89 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
E4F1Q66K89 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
E4F1Q66K89 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.48□□□□□ -1.85
E4F1Q66K89 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
E4F1Q66K89 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
E4F1Q66K89 MTND5P35-201ENST00000557537 1720 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 Y_RNA.40-201ENST00000362645 93 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 RNU5F-3P-201ENST00000363767 117 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 RNU6-1175P-201ENST00000365200 107 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 Y_RNA.569-201ENST00000384749 103 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 CYCSP48-201ENST00000417124 323 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.48□□□□□ -1.85
E4F1Q66K89 SETP5-201ENST00000437270 562 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 UQCRBP2-201ENST00000447827 297 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 AP001324.2-201ENST00000461163 319 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.48□□□□□ -1.85
E4F1Q66K89 SNORA31.1-201ENST00000515993 133 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 SNORA31.5-201ENST00000516190 133 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.48□□□□□ -1.85
E4F1Q66K89 MIR2682-201ENST00000580305 110 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.48□□□□□ -1.85
E4F1Q66K89 AC005176.2-201ENST00000596933 147 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 MZT1P2-201ENST00000604387 248 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 RNU6-91P-201ENST00000607774 107 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 IGHVIII-44-202ENST00000636235 289 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.48□□□□□ -1.85
E4F1Q66K89 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.48□□□□□ -1.85
E4F1Q66K89 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
E4F1Q66K89 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
E4F1Q66K89 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.48□□□□□ -1.85
E4F1Q66K89 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
E4F1Q66K89 AC010680.1-201ENST00000590024 3590 ntBASIC3.48□□□□□ -1.85
E4F1Q66K89 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
E4F1Q66K89 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
E4F1Q66K89 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.47□□□□□ -1.85
E4F1Q66K89 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
E4F1Q66K89 Y_RNA.117-201ENST00000363294 101 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 Y_RNA.570-201ENST00000384750 101 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 CBX3P9-201ENST00000402326 552 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 MIR548I3-201ENST00000408378 149 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 MIR548I1-201ENST00000408810 149 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.47□□□□□ -1.85
E4F1Q66K89 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.47□□□□□ -1.85
E4F1Q66K89 AC112771.1-201ENST00000463581 102 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.47□□□□□ -1.85
E4F1Q66K89 RNU2-31P-201ENST00000516954 155 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 MIR4276-201ENST00000584832 70 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.47□□□□□ -1.85
E4F1Q66K89 AC099778.2-201ENST00000610904 211 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 AC006001.4-201ENST00000622243 395 ntBASIC3.47□□□□□ -1.85
E4F1Q66K89 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
E4F1Q66K89 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.47□□□□□ -1.85
E4F1Q66K89 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
E4F1Q66K89 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
E4F1Q66K89 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
E4F1Q66K89 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
E4F1Q66K89 RNA5SP295-201ENST00000362655 121 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 Y_RNA.44-201ENST00000362676 108 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RNU6-1010P-201ENST00000362757 107 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RNU6-799P-201ENST00000363567 107 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RNU6-727P-201ENST00000363592 107 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 Y_RNA.274-201ENST00000364714 101 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 Y_RNA.297-201ENST00000364950 91 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 SNORA72.2-201ENST00000365028 127 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RNU6-378P-201ENST00000384324 107 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 MIR767-201ENST00000390228 109 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RNU6ATAC-201ENST00000408749 126 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RNU6-1077P-201ENST00000410506 102 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.46□□□□□ -1.86
E4F1Q66K89 PIGPP3-201ENST00000425307 415 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RPL23AP3-201ENST00000453844 468 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 PRELID3BP1-201ENST00000457142 540 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 AC007215.1-201ENST00000464893 276 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 AC103975.1-201ENST00000482506 483 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 RNU6-182P-201ENST00000516970 105 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.46□□□□□ -1.86
E4F1Q66K89 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.46□□□□□ -1.86
E4F1Q66K89 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.46□□□□□ -1.86
E4F1Q66K89 MIR4643-201ENST00000577473 78 ntBASIC3.46□□□□□ -1.86
E4F1Q66K89 MIR4423-201ENST00000580922 80 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms