Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPS29P27-201ENST00000463711 170 ntBASIC2.17□□□□□ -2.06
LMO4P61968 RPL23AP70-201ENST00000483361 460 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC093852.1-201ENST00000503587 266 ntBASIC2.17□□□□□ -2.06
LMO4P61968 RNU6-612P-201ENST00000516909 102 ntBASIC2.17□□□□□ -2.06
LMO4P61968 SNORD19.2-201ENST00000516978 73 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC109479.2-201ENST00000517842 174 ntBASIC2.17□□□□□ -2.06
LMO4P61968 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.17□□□□□ -2.06
LMO4P61968 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
LMO4P61968 MIR4635-201ENST00000583759 79 ntBASIC2.17□□□□□ -2.06
LMO4P61968 VN1R91P-201ENST00000594377 169 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC062037.2-201ENST00000610137 73 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC013412.1-201ENST00000610687 192 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC009318.2-201ENST00000610917 651 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.17□□□□□ -2.06
LMO4P61968 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.17□□□□□ -2.06
LMO4P61968 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.17□□□□□ -2.06
LMO4P61968 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.17□□□□□ -2.06
LMO4P61968 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
LMO4P61968 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.16□□□□□ -2.06
LMO4P61968 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
LMO4P61968 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LMO4P61968 Y_RNA.26-201ENST00000362539 101 ntBASIC2.16□□□□□ -2.06
LMO4P61968 Y_RNA.214-201ENST00000364201 112 ntBASIC2.16□□□□□ -2.06
LMO4P61968 Y_RNA.222-201ENST00000364264 102 ntBASIC2.16□□□□□ -2.06
LMO4P61968 SNORA68.1-201ENST00000364537 132 ntBASIC2.16□□□□□ -2.06
LMO4P61968 Y_RNA.276-201ENST00000364732 109 ntBASIC2.16□□□□□ -2.06
LMO4P61968 RNU6-336P-201ENST00000364891 107 ntBASIC2.16□□□□□ -2.06
LMO4P61968 Y_RNA.461-201ENST00000384263 103 ntBASIC2.16□□□□□ -2.06
LMO4P61968 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
LMO4P61968 RNU6-713P-201ENST00000384761 107 ntBASIC2.16□□□□□ -2.06
LMO4P61968 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.16□□□□□ -2.06
LMO4P61968 RNA5SP494-201ENST00000410653 129 ntBASIC2.16□□□□□ -2.06
LMO4P61968 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.16□□□□□ -2.06
LMO4P61968 AC009969.1-201ENST00000438726 172 ntBASIC2.16□□□□□ -2.06
LMO4P61968 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.16□□□□□ -2.06
LMO4P61968 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.16□□□□□ -2.06
LMO4P61968 RNY3P15-201ENST00000516297 97 ntBASIC2.16□□□□□ -2.06
LMO4P61968 RNU6-1183P-201ENST00000517054 60 ntBASIC2.16□□□□□ -2.06
LMO4P61968 SCARNA11.3-201ENST00000517276 130 ntBASIC2.16□□□□□ -2.06
LMO4P61968 AC144568.1-201ENST00000520139 137 ntBASIC2.16□□□□□ -2.06
LMO4P61968 AC006199.1-201ENST00000548728 219 ntBASIC2.16□□□□□ -2.06
LMO4P61968 AC021739.1-201ENST00000559631 174 ntBASIC2.16□□□□□ -2.06
LMO4P61968 AC090517.1-201ENST00000569307 266 ntBASIC2.16□□□□□ -2.06
LMO4P61968 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.16□□□□□ -2.06
LMO4P61968 AC078899.3-201ENST00000599065 212 ntBASIC2.16□□□□□ -2.06
LMO4P61968 AL442067.1-201ENST00000613261 223 ntBASIC2.16□□□□□ -2.06
LMO4P61968 MIR7515-201ENST00000637837 67 ntBASIC2.16□□□□□ -2.06
LMO4P61968 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
LMO4P61968 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LMO4P61968 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LMO4P61968 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
LMO4P61968 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
LMO4P61968 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.06
LMO4P61968 RNU6-78P-201ENST00000362897 107 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-806P-201ENST00000365147 105 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU5E-7P-201ENST00000365290 117 ntBASIC2.15□□□□□ -2.07
LMO4P61968 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-1083P-201ENST00000384022 107 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-72P-201ENST00000384285 79 ntBASIC2.15□□□□□ -2.07
LMO4P61968 Y_RNA.483-201ENST00000384380 101 ntBASIC2.15□□□□□ -2.07
LMO4P61968 Y_RNA.551-201ENST00000384661 102 ntBASIC2.15□□□□□ -2.07
LMO4P61968 MIR27B-201ENST00000385129 97 ntBASIC2.15□□□□□ -2.07
LMO4P61968 MT-TW-201ENST00000387382 68 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-700P-201ENST00000391043 107 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-847P-201ENST00000411115 108 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AC009963.1-201ENST00000417265 157 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AC007098.1-201ENST00000420122 367 ntBASIC2.15□□□□□ -2.07
LMO4P61968 USP9YP16-201ENST00000430287 407 ntBASIC2.15□□□□□ -2.07
LMO4P61968 MTCO3P29-201ENST00000432119 779 ntBASIC2.15□□□□□ -2.07
LMO4P61968 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.15□□□□□ -2.07
LMO4P61968 RPS15AP7-201ENST00000439294 405 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AL161651.1-201ENST00000440882 223 ntBASIC2.15□□□□□ -2.07
LMO4P61968 USP9YP23-201ENST00000455085 407 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RPL30P10-201ENST00000488148 337 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.15□□□□□ -2.07
LMO4P61968 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-408P-201ENST00000515910 100 ntBASIC2.15□□□□□ -2.07
LMO4P61968 SNORA25.11-201ENST00000515935 105 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU5F-8P-201ENST00000515941 111 ntBASIC2.15□□□□□ -2.07
LMO4P61968 SCARNA17.1-201ENST00000516211 143 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-397P-201ENST00000516226 104 ntBASIC2.15□□□□□ -2.07
LMO4P61968 SCARNA17.2-201ENST00000516334 143 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-388P-201ENST00000517012 105 ntBASIC2.15□□□□□ -2.07
LMO4P61968 RNU6-389P-201ENST00000517048 105 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.15□□□□□ -2.07
LMO4P61968 AC109329.1-201ENST00000518744 317 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.15□□□□□ -2.07
LMO4P61968 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.15□□□□□ -2.07
LMO4P61968 AC023157.2-201ENST00000540596 141 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AC027176.1-201ENST00000560204 514 ntBASIC2.15□□□□□ -2.07
LMO4P61968 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.15□□□□□ -2.07
LMO4P61968 AC125232.2-201ENST00000592457 143 ntBASIC2.15□□□□□ -2.07
LMO4P61968 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.15□□□□□ -2.07
LMO4P61968 AC011373.1-201ENST00000607270 237 ntBASIC2.15□□□□□ -2.07
LMO4P61968 SCARNA17.4-201ENST00000614296 143 ntBASIC2.15□□□□□ -2.07
LMO4P61968 U4.7-201ENST00000638126 106 ntBASIC2.15□□□□□ -2.07
LMO4P61968 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.15□□□□□ -2.07
LMO4P61968 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LMO4P61968 Y_RNA.64-201ENST00000362845 102 ntBASIC2.14□□□□□ -2.07
LMO4P61968 RNU4-50P-201ENST00000364361 141 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms