Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDH6P55285 AL390237.1-201ENST00000404226 1415 ntBASIC1.34□□□□□ -2.19
CDH6P55285 RNU4-91P-201ENST00000364778 135 ntBASIC1.34□□□□□ -2.19
CDH6P55285 SNORD31B-201ENST00000364977 69 ntBASIC1.34□□□□□ -2.19
CDH6P55285 RNU2-41P-201ENST00000410991 178 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.34□□□□□ -2.19
CDH6P55285 FTH1P12-201ENST00000432137 551 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC002486.1-201ENST00000435098 391 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
CDH6P55285 RPL36AP21-201ENST00000490372 323 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC091874.1-201ENST00000511402 339 ntBASIC1.34□□□□□ -2.19
CDH6P55285 RNA5SP445-201ENST00000515889 115 ntBASIC1.34□□□□□ -2.19
CDH6P55285 RNU6-567P-201ENST00000516746 107 ntBASIC1.34□□□□□ -2.19
CDH6P55285 EIF4A1P12-201ENST00000551910 141 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
CDH6P55285 HMGB1P33-201ENST00000563485 527 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.34□□□□□ -2.19
CDH6P55285 SNORA77B-201ENST00000578179 125 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.34□□□□□ -2.19
CDH6P55285 MIR5583-1-201ENST00000580941 59 ntBASIC1.34□□□□□ -2.19
CDH6P55285 MIR3941-201ENST00000582572 103 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC040904.1-201ENST00000590850 223 ntBASIC1.34□□□□□ -2.19
CDH6P55285 AC008536.2-201ENST00000607284 349 ntBASIC1.34□□□□□ -2.19
CDH6P55285 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CDH6P55285 AC068205.3-201ENST00000636385 468 ntBASIC1.34□□□□□ -2.19
CDH6P55285 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CDH6P55285 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDH6P55285 RNU6-552P-201ENST00000362869 119 ntBASIC1.33□□□□□ -2.2
CDH6P55285 Y_RNA.140-201ENST00000363474 103 ntBASIC1.33□□□□□ -2.2
CDH6P55285 RNU6-271P-201ENST00000363858 105 ntBASIC1.33□□□□□ -2.2
CDH6P55285 RNU6-606P-201ENST00000384721 111 ntBASIC1.33□□□□□ -2.2
CDH6P55285 MIR520A-201ENST00000384862 85 ntBASIC1.33□□□□□ -2.2
CDH6P55285 RNU6-360P-201ENST00000390944 104 ntBASIC1.33□□□□□ -2.2
CDH6P55285 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CDH6P55285 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
CDH6P55285 JTBP1-201ENST00000441314 247 ntBASIC1.33□□□□□ -2.2
CDH6P55285 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.33□□□□□ -2.2
CDH6P55285 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
CDH6P55285 RNU7-14P-201ENST00000459331 62 ntBASIC1.33□□□□□ -2.2
CDH6P55285 TOMM22P6-201ENST00000465035 409 ntBASIC1.33□□□□□ -2.2
CDH6P55285 RPL26P26-201ENST00000480251 434 ntBASIC1.33□□□□□ -2.2
CDH6P55285 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.33□□□□□ -2.2
CDH6P55285 RNU5F-4P-201ENST00000516581 114 ntBASIC1.33□□□□□ -2.2
CDH6P55285 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.33□□□□□ -2.2
CDH6P55285 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.33□□□□□ -2.2
CDH6P55285 MTCO3P23-201ENST00000561363 289 ntBASIC1.33□□□□□ -2.2
CDH6P55285 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.33□□□□□ -2.2
CDH6P55285 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.33□□□□□ -2.2
CDH6P55285 AC069114.2-201ENST00000604699 304 ntBASIC1.33□□□□□ -2.2
CDH6P55285 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
CDH6P55285 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
CDH6P55285 Y_RNA.504-201ENST00000384481 104 ntBASIC1.32□□□□□ -2.2
CDH6P55285 SNORA12.2-201ENST00000391040 156 ntBASIC1.32□□□□□ -2.2
CDH6P55285 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
CDH6P55285 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH6P55285 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
CDH6P55285 C8orf59P1-201ENST00000429930 303 ntBASIC1.32□□□□□ -2.2
CDH6P55285 CETN4P-201ENST00000432407 469 ntBASIC1.32□□□□□ -2.2
CDH6P55285 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH6P55285 AL031667.1-201ENST00000440222 725 ntBASIC1.32□□□□□ -2.2
CDH6P55285 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.32□□□□□ -2.2
CDH6P55285 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.32□□□□□ -2.2
CDH6P55285 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.32□□□□□ -2.2
CDH6P55285 SNRPFP3-201ENST00000457792 225 ntBASIC1.32□□□□□ -2.2
CDH6P55285 AC016925.1-201ENST00000458303 298 ntBASIC1.32□□□□□ -2.2
CDH6P55285 AC007547.1-201ENST00000462177 490 ntBASIC1.32□□□□□ -2.2
CDH6P55285 RPL9P9-202ENST00000466501 579 ntBASIC1.32□□□□□ -2.2
CDH6P55285 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.32□□□□□ -2.2
CDH6P55285 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH6P55285 RNU6-1098P-201ENST00000516772 96 ntBASIC1.32□□□□□ -2.2
CDH6P55285 Y_RNA.717-201ENST00000517106 92 ntBASIC1.32□□□□□ -2.2
CDH6P55285 RNU6-902P-201ENST00000517212 91 ntBASIC1.32□□□□□ -2.2
CDH6P55285 AC069113.1-201ENST00000517763 267 ntBASIC1.32□□□□□ -2.2
CDH6P55285 RRN3P3-201ENST00000549207 578 ntBASIC1.32□□□□□ -2.2
CDH6P55285 AC021231.3-201ENST00000558497 370 ntBASIC1.32□□□□□ -2.2
CDH6P55285 CYP4A27P-201ENST00000567218 190 ntBASIC1.32□□□□□ -2.2
CDH6P55285 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.32□□□□□ -2.2
CDH6P55285 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
CDH6P55285 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.32□□□□□ -2.2
CDH6P55285 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDH6P55285 Y_RNA.255-201ENST00000364581 97 ntBASIC1.31□□□□□ -2.2
CDH6P55285 SNORA36A-201ENST00000384221 132 ntBASIC1.31□□□□□ -2.2
CDH6P55285 RNU6-378P-201ENST00000384324 107 ntBASIC1.31□□□□□ -2.2
CDH6P55285 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.31□□□□□ -2.2
CDH6P55285 RNU2-29P-201ENST00000410423 189 ntBASIC1.31□□□□□ -2.2
CDH6P55285 RN7SKP142-201ENST00000411236 328 ntBASIC1.31□□□□□ -2.2
CDH6P55285 MTCO1P21-201ENST00000416634 589 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
CDH6P55285 MTCO2P11-201ENST00000431069 680 ntBASIC1.31□□□□□ -2.2
CDH6P55285 MTND4P32-201ENST00000437189 1237 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AL121601.2-201ENST00000438019 707 ntBASIC1.31□□□□□ -2.2
CDH6P55285 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH6P55285 AC007395.1-201ENST00000451333 677 ntBASIC1.31□□□□□ -2.2
CDH6P55285 ATP5J2P3-201ENST00000451550 258 ntBASIC1.31□□□□□ -2.2
CDH6P55285 RPS26P55-201ENST00000471178 356 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH6P55285 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.31□□□□□ -2.2
CDH6P55285 RNU6-430P-201ENST00000517078 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms