Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU6-1022P-201ENST00000365049 104 ntBASIC5.04□□□□□ -1.6
NUBP1P53384 MIR767-201ENST00000390228 109 ntBASIC5.04□□□□□ -1.6
NUBP1P53384 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC5.04□□□□□ -1.6
NUBP1P53384 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.04□□□□□ -1.6
NUBP1P53384 AC015795.1-201ENST00000513669 327 ntBASIC5.04□□□□□ -1.6
NUBP1P53384 SNORD36C-201ENST00000516733 66 ntBASIC5.04□□□□□ -1.6
NUBP1P53384 Y_RNA.705-201ENST00000516862 110 ntBASIC5.04□□□□□ -1.6
NUBP1P53384 MIR3939-201ENST00000582614 106 ntBASIC5.04□□□□□ -1.6
NUBP1P53384 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NUBP1P53384 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NUBP1P53384 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NUBP1P53384 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUBP1P53384 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.03□□□□□ -1.6
NUBP1P53384 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
NUBP1P53384 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUBP1P53384 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.03□□□□□ -1.6
NUBP1P53384 SNORD115-19-201ENST00000363098 82 ntBASIC5.03□□□□□ -1.6
NUBP1P53384 SNORD115-18-201ENST00000363293 82 ntBASIC5.03□□□□□ -1.6
NUBP1P53384 RNU4-67P-201ENST00000364569 141 ntBASIC5.03□□□□□ -1.6
NUBP1P53384 SNORD115-17-201ENST00000364612 82 ntBASIC5.03□□□□□ -1.6
NUBP1P53384 Y_RNA.547-201ENST00000384654 119 ntBASIC5.03□□□□□ -1.6
NUBP1P53384 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.03□□□□□ -1.6
NUBP1P53384 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.03□□□□□ -1.6
NUBP1P53384 RNU6-965P-201ENST00000516721 96 ntBASIC5.03□□□□□ -1.6
NUBP1P53384 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC5.03□□□□□ -1.6
NUBP1P53384 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUBP1P53384 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUBP1P53384 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUBP1P53384 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUBP1P53384 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUBP1P53384 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
NUBP1P53384 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.03□□□□□ -1.6
NUBP1P53384 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NUBP1P53384 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUBP1P53384 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC5.02□□□□□ -1.61
NUBP1P53384 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.02□□□□□ -1.61
NUBP1P53384 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.02□□□□□ -1.61
NUBP1P53384 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUBP1P53384 RNA5SP28-201ENST00000363841 119 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 RN7SKP177-201ENST00000410567 355 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 BTF3P4-201ENST00000418852 495 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 RPS12P10-201ENST00000427031 377 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.02□□□□□ -1.61
NUBP1P53384 AC087499.4-201ENST00000448505 178 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 AL049830.1-201ENST00000468034 425 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 AP003484.1-201ENST00000530974 250 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 ZYXP1-201ENST00000617638 118 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 AC091932.4-201ENST00000623386 200 ntBASIC5.02□□□□□ -1.61
NUBP1P53384 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
NUBP1P53384 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
NUBP1P53384 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
NUBP1P53384 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUBP1P53384 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUBP1P53384 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.01□□□□□ -1.61
NUBP1P53384 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUBP1P53384 RNU6-1084P-201ENST00000362498 107 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 SNORD115-35-201ENST00000365122 82 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 RNU6-1083P-201ENST00000384022 107 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 SCARNA22-201ENST00000503991 125 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC5.01□□□□□ -1.61
NUBP1P53384 AC244107.2-201ENST00000611773 76 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 MIR1248-201ENST00000629190 106 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 AL672167.1-203ENST00000641299 2975 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUBP1P53384 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUBP1P53384 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.01□□□□□ -1.61
NUBP1P53384 MAPK10-349ENST00000641767 3661 ntBASIC5.01□□□□□ -1.61
NUBP1P53384 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
NUBP1P53384 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
NUBP1P53384 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5□□□□□ -1.61
NUBP1P53384 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5□□□□□ -1.61
NUBP1P53384 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5□□□□□ -1.61
NUBP1P53384 AL359955.1-201ENST00000455242 3275 ntBASIC5□□□□□ -1.61
NUBP1P53384 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5□□□□□ -1.61
NUBP1P53384 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
NUBP1P53384 RNU1-94P-201ENST00000362627 173 ntBASIC5□□□□□ -1.61
NUBP1P53384 Y_RNA.190-201ENST00000363964 101 ntBASIC5□□□□□ -1.61
NUBP1P53384 SNORA14A-201ENST00000364773 135 ntBASIC5□□□□□ -1.61
NUBP1P53384 RNA5SP171-201ENST00000391071 115 ntBASIC5□□□□□ -1.61
NUBP1P53384 AL627390.1-201ENST00000396055 340 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms