Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RNU6-78P-201ENST00000362897 107 ntBASIC0.13□□□□□ -2.39
SDC4P31431 RNU6-418P-201ENST00000384035 107 ntBASIC0.13□□□□□ -2.39
SDC4P31431 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
SDC4P31431 RN7SKP266-201ENST00000410232 287 ntBASIC0.13□□□□□ -2.39
SDC4P31431 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.13□□□□□ -2.39
SDC4P31431 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.13□□□□□ -2.39
SDC4P31431 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.13□□□□□ -2.39
SDC4P31431 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
SDC4P31431 AC027338.1-201ENST00000514840 825 ntBASIC0.13□□□□□ -2.39
SDC4P31431 Y_RNA.673-201ENST00000516306 88 ntBASIC0.13□□□□□ -2.39
SDC4P31431 SNORA31.10-201ENST00000516482 106 ntBASIC0.13□□□□□ -2.39
SDC4P31431 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.13□□□□□ -2.39
SDC4P31431 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
SDC4P31431 AL603839.4-201ENST00000624658 1005 ntBASIC0.13□□□□□ -2.39
SDC4P31431 AC010487.4-201ENST00000637027 61 ntBASIC0.13□□□□□ -2.39
SDC4P31431 MIRLET7D-201ENST00000362263 87 ntBASIC0.12□□□□□ -2.39
SDC4P31431 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
SDC4P31431 MIR578-201ENST00000384828 96 ntBASIC0.12□□□□□ -2.39
SDC4P31431 SNORA12.1-201ENST00000390873 148 ntBASIC0.12□□□□□ -2.39
SDC4P31431 MIR1284-201ENST00000408337 120 ntBASIC0.12□□□□□ -2.39
SDC4P31431 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SDC4P31431 MIR320C1-201ENST00000408566 88 ntBASIC0.12□□□□□ -2.39
SDC4P31431 AL031779.1-201ENST00000415663 330 ntBASIC0.12□□□□□ -2.39
SDC4P31431 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.12□□□□□ -2.39
SDC4P31431 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.12□□□□□ -2.39
SDC4P31431 UBE2D3P3-201ENST00000426992 425 ntBASIC0.12□□□□□ -2.39
SDC4P31431 MTND5P2-201ENST00000442927 1142 ntBASIC0.12□□□□□ -2.39
SDC4P31431 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.12□□□□□ -2.39
SDC4P31431 RNU1-86P-201ENST00000516108 154 ntBASIC0.12□□□□□ -2.39
SDC4P31431 RNU1-107P-201ENST00000516617 154 ntBASIC0.12□□□□□ -2.39
SDC4P31431 MTND2P7-201ENST00000521337 640 ntBASIC0.12□□□□□ -2.39
SDC4P31431 RPL17P51-201ENST00000605218 238 ntBASIC0.12□□□□□ -2.39
SDC4P31431 AL138726.1-201ENST00000614873 333 ntBASIC0.12□□□□□ -2.39
SDC4P31431 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.12□□□□□ -2.39
SDC4P31431 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.12□□□□□ -2.39
SDC4P31431 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.12□□□□□ -2.39
SDC4P31431 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SDC4P31431 MTND4P5-201ENST00000435821 1374 ntBASIC0.11□□□□□ -2.39
SDC4P31431 RNU6-609P-201ENST00000365459 107 ntBASIC0.11□□□□□ -2.39
SDC4P31431 RNU6-1179P-201ENST00000384667 107 ntBASIC0.11□□□□□ -2.39
SDC4P31431 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SDC4P31431 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.11□□□□□ -2.39
SDC4P31431 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.11□□□□□ -2.39
SDC4P31431 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.11□□□□□ -2.39
SDC4P31431 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.11□□□□□ -2.39
SDC4P31431 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.11□□□□□ -2.39
SDC4P31431 AL049830.1-201ENST00000468034 425 ntBASIC0.11□□□□□ -2.39
SDC4P31431 SNRPGP7-201ENST00000469016 106 ntBASIC0.11□□□□□ -2.39
SDC4P31431 AP000797.1-201ENST00000478870 387 ntBASIC0.11□□□□□ -2.39
SDC4P31431 AC108740.1-201ENST00000498629 225 ntBASIC0.11□□□□□ -2.39
SDC4P31431 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
SDC4P31431 SNORA70.12-201ENST00000516084 153 ntBASIC0.11□□□□□ -2.39
SDC4P31431 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.11□□□□□ -2.39
SDC4P31431 AP002453.2-201ENST00000533503 320 ntBASIC0.11□□□□□ -2.39
SDC4P31431 AC092354.1-201ENST00000606057 376 ntBASIC0.11□□□□□ -2.39
SDC4P31431 RNU6-1031P-201ENST00000384773 107 ntBASIC0.1□□□□□ -2.39
SDC4P31431 AL355994.1-201ENST00000424379 260 ntBASIC0.1□□□□□ -2.39
SDC4P31431 TIMM9P3-201ENST00000428659 274 ntBASIC0.1□□□□□ -2.39
SDC4P31431 AC113347.3-201ENST00000509113 148 ntBASIC0.1□□□□□ -2.39
SDC4P31431 RNU6-751P-201ENST00000516382 101 ntBASIC0.1□□□□□ -2.39
SDC4P31431 AC087883.1-201ENST00000551882 391 ntBASIC0.1□□□□□ -2.39
SDC4P31431 RN7SL793P-201ENST00000583259 296 ntBASIC0.1□□□□□ -2.39
SDC4P31431 AL606834.3-201ENST00000602615 496 ntBASIC0.1□□□□□ -2.39
SDC4P31431 RNY3P13-201ENST00000365542 102 ntBASIC0.09□□□□□ -2.4
SDC4P31431 RNU5E-6P-201ENST00000365574 115 ntBASIC0.09□□□□□ -2.4
SDC4P31431 SNORD116-13-201ENST00000384408 92 ntBASIC0.09□□□□□ -2.4
SDC4P31431 SNORD89-201ENST00000390981 114 ntBASIC0.09□□□□□ -2.4
SDC4P31431 RNA5SP201-201ENST00000410316 124 ntBASIC0.09□□□□□ -2.4
SDC4P31431 HIGD1AP15-201ENST00000416198 280 ntBASIC0.09□□□□□ -2.4
SDC4P31431 RPL23AP30-201ENST00000432419 501 ntBASIC0.09□□□□□ -2.4
SDC4P31431 snoU13.25-201ENST00000458945 104 ntBASIC0.09□□□□□ -2.4
SDC4P31431 U7.7-201ENST00000459276 60 ntBASIC0.09□□□□□ -2.4
SDC4P31431 AL049829.1-201ENST00000465411 156 ntBASIC0.09□□□□□ -2.4
SDC4P31431 HMGB1P29-201ENST00000505659 499 ntBASIC0.09□□□□□ -2.4
SDC4P31431 AC021146.8-201ENST00000507455 733 ntBASIC0.09□□□□□ -2.4
SDC4P31431 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.09□□□□□ -2.4
SDC4P31431 RNU5F-4P-201ENST00000516581 114 ntBASIC0.09□□□□□ -2.4
SDC4P31431 RNU6-334P-201ENST00000517072 102 ntBASIC0.09□□□□□ -2.4
SDC4P31431 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.09□□□□□ -2.4
SDC4P31431 AL390123.1-201ENST00000603216 237 ntBASIC0.09□□□□□ -2.4
SDC4P31431 AC108747.1-201ENST00000609508 535 ntBASIC0.09□□□□□ -2.4
SDC4P31431 7SK.10-201ENST00000621414 298 ntBASIC0.09□□□□□ -2.4
SDC4P31431 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.09□□□□□ -2.4
SDC4P31431 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.09□□□□□ -2.4
SDC4P31431 AC103706.2-201ENST00000638080 240 ntBASIC0.09□□□□□ -2.4
SDC4P31431 AC092268.1-201ENST00000342691 405 ntBASIC0.08□□□□□ -2.4
SDC4P31431 RNU6-545P-201ENST00000362681 104 ntBASIC0.08□□□□□ -2.4
SDC4P31431 Y_RNA.118-201ENST00000363300 101 ntBASIC0.08□□□□□ -2.4
SDC4P31431 Y_RNA.132-201ENST00000363421 102 ntBASIC0.08□□□□□ -2.4
SDC4P31431 RNU6-511P-201ENST00000363496 107 ntBASIC0.08□□□□□ -2.4
SDC4P31431 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.08□□□□□ -2.4
SDC4P31431 Y_RNA.393-201ENST00000383936 102 ntBASIC0.08□□□□□ -2.4
SDC4P31431 RNU6-342P-201ENST00000384521 104 ntBASIC0.08□□□□□ -2.4
SDC4P31431 RPS20P2-201ENST00000402520 389 ntBASIC0.08□□□□□ -2.4
SDC4P31431 RPL22P18-201ENST00000417197 377 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AL590135.1-201ENST00000422215 156 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC019205.3-201ENST00000424573 156 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC244098.3-201ENST00000424803 96 ntBASIC0.08□□□□□ -2.4
SDC4P31431 CALM2P2-201ENST00000428512 440 ntBASIC0.08□□□□□ -2.4
SDC4P31431 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms