Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ERCC3P19447 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ERCC3P19447 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.98□□□□□ -1.77
ERCC3P19447 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ERCC3P19447 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ERCC3P19447 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC3P19447 RNU6-283P-201ENST00000364788 107 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 Y_RNA.461-201ENST00000384263 103 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 RNU6-611P-201ENST00000384276 104 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 MIR329-1-201ENST00000385028 80 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 MIR29B2-201ENST00000385055 81 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 RNA5SP213-201ENST00000391031 106 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 SNORA11.2-201ENST00000408318 127 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 MIR1302-6-201ENST00000408466 90 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 AC004386.2-201ENST00000441858 148 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 UQCRBP2-201ENST00000447827 297 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 RNU6-408P-201ENST00000515910 100 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 Y_RNA.683-201ENST00000516508 93 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 MZT1P2-201ENST00000604387 248 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 AC005562.2-201ENST00000618264 111 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC3P19447 MTND5P35-201ENST00000557537 1720 ntBASIC3.97□□□□□ -1.77
ERCC3P19447 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC3P19447 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
ERCC3P19447 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ERCC3P19447 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.96□□□□□ -1.78
ERCC3P19447 AC092435.3-201ENST00000565538 3654 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AC080128.1-201ENST00000474389 1917 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERCC3P19447 Y_RNA.276-201ENST00000364732 109 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 SNORA18.3-201ENST00000384122 132 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 RNU6-793P-201ENST00000384233 104 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 SNORA48.5-201ENST00000391143 135 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 U3.39-201ENST00000408569 239 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 RN7SKP111-201ENST00000410349 271 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AL353705.1-201ENST00000433468 480 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 RPL23AP58-201ENST00000440453 469 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AC092185.1-201ENST00000491371 97 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 RN7SL504P-201ENST00000494496 287 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AC023141.11-201ENST00000508864 202 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 RNU1-117P-201ENST00000517041 158 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AP003733.2-201ENST00000529409 171 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AC004817.2-201ENST00000561794 651 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 MIR5680-201ENST00000577577 84 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AC010620.2-201ENST00000600135 313 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AL356575.1-201ENST00000603008 283 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 AC069294.1-201ENST00000608397 350 ntBASIC3.96□□□□□ -1.78
ERCC3P19447 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERCC3P19447 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
ERCC3P19447 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.95□□□□□ -1.78
ERCC3P19447 SNORA68.1-201ENST00000364537 132 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 Y_RNA.401-201ENST00000383965 117 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 RNU6-245P-201ENST00000384020 107 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 MIR1289-1-201ENST00000408836 144 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 BX679664.1-201ENST00000434429 253 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 RPS29P31-201ENST00000446147 164 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 LINC01399-202ENST00000458450 244 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 AC090515.1-201ENST00000465295 476 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 RN7SL594P-201ENST00000470590 287 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 FCF1P8-201ENST00000510322 597 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 RNU6-107P-201ENST00000516643 102 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 RNU2-44P-201ENST00000516795 194 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 RNU6-586P-201ENST00000517265 104 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.95□□□□□ -1.78
ERCC3P19447 RRN3P3-201ENST00000549207 578 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 AC026470.2-201ENST00000561492 181 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 MYL12BP1-201ENST00000569826 507 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 AC105245.1-201ENST00000581934 244 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 AC023043.3-201ENST00000593113 385 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.95□□□□□ -1.78
ERCC3P19447 MIR8062-201ENST00000621515 85 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 U6.104-201ENST00000637979 90 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ERCC3P19447 AC010329.5-201ENST00000623497 2174 ntBASIC3.95□□□□□ -1.78
ERCC3P19447 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ERCC3P19447 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ERCC3P19447 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ERCC3P19447 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ERCC3P19447 RNA5SP374-201ENST00000362939 125 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 RNA5SP42-201ENST00000364278 115 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 RNU6-937P-201ENST00000384325 106 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 Y_RNA.602-201ENST00000410535 92 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 AL513477.1-202ENST00000417061 214 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 Z75741.1-201ENST00000446793 314 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 SNORA40.9-201ENST00000515895 93 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 SNORA31.26-201ENST00000517250 137 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.94□□□□□ -1.78
ERCC3P19447 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.94□□□□□ -1.78
ERCC3P19447 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.94□□□□□ -1.78
ERCC3P19447 MIR4276-201ENST00000584832 70 ntBASIC3.94□□□□□ -1.78
ERCC3P19447 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC3P19447 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC3P19447 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC3P19447 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC3P19447 AL356274.2-201ENST00000624379 3752 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.93□□□□□ -1.78
ERCC3P19447 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ERCC3P19447 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms