Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 Y_RNA.383-201ENST00000383855 97 ntBASIC3.36□□□□□ -1.87
ATF4P18848 Y_RNA.416-201ENST00000384014 113 ntBASIC3.36□□□□□ -1.87
ATF4P18848 Y_RNA.552-201ENST00000384665 112 ntBASIC3.36□□□□□ -1.87
ATF4P18848 MIR548B-201ENST00000385247 97 ntBASIC3.36□□□□□ -1.87
ATF4P18848 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ATF4P18848 AC009963.1-201ENST00000417265 157 ntBASIC3.36□□□□□ -1.87
ATF4P18848 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.36□□□□□ -1.87
ATF4P18848 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ATF4P18848 HMGN2P9-201ENST00000476875 229 ntBASIC3.36□□□□□ -1.87
ATF4P18848 RPS29P26-201ENST00000477483 171 ntBASIC3.36□□□□□ -1.87
ATF4P18848 AC091826.1-201ENST00000514065 313 ntBASIC3.36□□□□□ -1.87
ATF4P18848 RNA5SP490-201ENST00000517141 136 ntBASIC3.36□□□□□ -1.87
ATF4P18848 RNU6-794P-201ENST00000517261 64 ntBASIC3.36□□□□□ -1.87
ATF4P18848 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.36□□□□□ -1.87
ATF4P18848 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.36□□□□□ -1.87
ATF4P18848 AC005357.1-201ENST00000588399 301 ntBASIC3.36□□□□□ -1.87
ATF4P18848 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.36□□□□□ -1.87
ATF4P18848 AC083809.1-201ENST00000615051 472 ntBASIC3.36□□□□□ -1.87
ATF4P18848 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.36□□□□□ -1.87
ATF4P18848 MIR7702-201ENST00000621931 59 ntBASIC3.36□□□□□ -1.87
ATF4P18848 AC140479.6-201ENST00000633535 357 ntBASIC3.36□□□□□ -1.87
ATF4P18848 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATF4P18848 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATF4P18848 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.36□□□□□ -1.87
ATF4P18848 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
ATF4P18848 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATF4P18848 AC093010.3-201ENST00000570269 15214 ntBASIC3.36□□□□□ -1.87
ATF4P18848 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ATF4P18848 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.35□□□□□ -1.87
ATF4P18848 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.35□□□□□ -1.87
ATF4P18848 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATF4P18848 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATF4P18848 RNU6-1180P-201ENST00000364935 107 ntBASIC3.35□□□□□ -1.87
ATF4P18848 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATF4P18848 RPEP3-201ENST00000425462 676 ntBASIC3.35□□□□□ -1.87
ATF4P18848 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
ATF4P18848 RNU6-388P-201ENST00000517012 105 ntBASIC3.35□□□□□ -1.87
ATF4P18848 RNU6-389P-201ENST00000517048 105 ntBASIC3.35□□□□□ -1.87
ATF4P18848 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
ATF4P18848 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.35□□□□□ -1.87
ATF4P18848 MIR3684-201ENST00000579779 74 ntBASIC3.35□□□□□ -1.87
ATF4P18848 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.35□□□□□ -1.87
ATF4P18848 MIR1248-201ENST00000629190 106 ntBASIC3.35□□□□□ -1.87
ATF4P18848 AL773545.4-201ENST00000637262 310 ntBASIC3.35□□□□□ -1.87
ATF4P18848 AL513478.4-201ENST00000641636 310 ntBASIC3.35□□□□□ -1.87
ATF4P18848 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.35□□□□□ -1.87
ATF4P18848 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
ATF4P18848 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
ATF4P18848 IPO8P1-201ENST00000455509 3109 ntBASIC3.34□□□□□ -1.87
ATF4P18848 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.34□□□□□ -1.87
ATF4P18848 Y_RNA.54-201ENST00000362766 105 ntBASIC3.34□□□□□ -1.87
ATF4P18848 RNU1-23P-201ENST00000363361 144 ntBASIC3.34□□□□□ -1.87
ATF4P18848 AL139281.1-201ENST00000422120 335 ntBASIC3.34□□□□□ -1.87
ATF4P18848 AC024067.1-201ENST00000426199 223 ntBASIC3.34□□□□□ -1.87
ATF4P18848 AC092427.1-202ENST00000430569 476 ntBASIC3.34□□□□□ -1.87
ATF4P18848 RNU7-57P-201ENST00000459540 60 ntBASIC3.34□□□□□ -1.87
ATF4P18848 ATP5EP1-201ENST00000510257 156 ntBASIC3.34□□□□□ -1.87
ATF4P18848 Y_RNA.673-201ENST00000516306 88 ntBASIC3.34□□□□□ -1.87
ATF4P18848 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.34□□□□□ -1.87
ATF4P18848 AP001781.1-201ENST00000530977 207 ntBASIC3.34□□□□□ -1.87
ATF4P18848 AP002001.1-203ENST00000534002 267 ntBASIC3.34□□□□□ -1.87
ATF4P18848 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.34□□□□□ -1.87
ATF4P18848 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.34□□□□□ -1.87
ATF4P18848 MIR4277-201ENST00000578298 84 ntBASIC3.34□□□□□ -1.87
ATF4P18848 MIR3668-201ENST00000582138 75 ntBASIC3.34□□□□□ -1.87
ATF4P18848 MIR6716-201ENST00000613413 80 ntBASIC3.34□□□□□ -1.87
ATF4P18848 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.34□□□□□ -1.87
ATF4P18848 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATF4P18848 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATF4P18848 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATF4P18848 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ATF4P18848 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ATF4P18848 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATF4P18848 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATF4P18848 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
ATF4P18848 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATF4P18848 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
ATF4P18848 Y_RNA.60-201ENST00000362831 98 ntBASIC3.33□□□□□ -1.88
ATF4P18848 RNA5SP447-201ENST00000363749 119 ntBASIC3.33□□□□□ -1.88
ATF4P18848 RNU6-324P-201ENST00000363957 106 ntBASIC3.33□□□□□ -1.88
ATF4P18848 RNU6-743P-201ENST00000364151 106 ntBASIC3.33□□□□□ -1.88
ATF4P18848 RNU6-1248P-201ENST00000391096 64 ntBASIC3.33□□□□□ -1.88
ATF4P18848 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.33□□□□□ -1.88
ATF4P18848 AL356387.2-201ENST00000422272 243 ntBASIC3.33□□□□□ -1.88
ATF4P18848 AC011998.1-201ENST00000433403 117 ntBASIC3.33□□□□□ -1.88
ATF4P18848 HMGN2P18-201ENST00000450680 270 ntBASIC3.33□□□□□ -1.88
ATF4P18848 RPL23AP3-201ENST00000453844 468 ntBASIC3.33□□□□□ -1.88
ATF4P18848 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.33□□□□□ -1.88
ATF4P18848 RNU6-948P-201ENST00000516374 107 ntBASIC3.33□□□□□ -1.88
ATF4P18848 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.33□□□□□ -1.88
ATF4P18848 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.33□□□□□ -1.88
ATF4P18848 BX284668.6-201ENST00000606899 438 ntBASIC3.33□□□□□ -1.88
ATF4P18848 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATF4P18848 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.33□□□□□ -1.88
ATF4P18848 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATF4P18848 AC009487.4-201ENST00000624969 3585 ntBASIC3.33□□□□□ -1.88
ATF4P18848 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATF4P18848 AC135776.4-201ENST00000624300 1904 ntBASIC3.32□□□□□ -1.88
ATF4P18848 Y_RNA.20-201ENST00000362479 113 ntBASIC3.32□□□□□ -1.88
ATF4P18848 RNU6-1266P-201ENST00000362794 105 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms