Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.92
DDX56Q9NY93 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX56Q9NY93 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DDX56Q9NY93 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 RNVU1-14-201ENST00000384770 164 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 SNORA12.2-201ENST00000391040 156 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 SNORA75.6-201ENST00000391318 127 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AL357139.1-201ENST00000407792 426 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC096664.2-201ENST00000411843 406 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC007098.1-201ENST00000420122 367 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 YME1L1P1-201ENST00000429435 297 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC068781.1-201ENST00000488231 618 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 RPL17P19-201ENST00000489069 552 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC074250.1-201ENST00000511117 192 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 AP000889.1-201ENST00000530968 660 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 NDUFA5P6-201ENST00000542110 379 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC107016.2-201ENST00000547968 190 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC010928.2-201ENST00000588017 287 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC005014.2-201ENST00000607795 599 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 AC108206.1-201ENST00000570186 4159 ntBASIC3.08□□□□□ -1.92
DDX56Q9NY93 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX56Q9NY93 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX56Q9NY93 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
DDX56Q9NY93 SNORA71.3-201ENST00000362582 128 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 Y_RNA.146-201ENST00000363549 102 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 SNORD115-8-201ENST00000363856 82 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 SNORD115-38-201ENST00000365037 82 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 RNU6-234P-201ENST00000365229 104 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 RNU6-17P-201ENST00000384245 107 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 RNU6-18P-201ENST00000384527 107 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 MIR23B-201ENST00000384832 97 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 SUMO1P4-201ENST00000429430 302 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.07□□□□□ -1.92
DDX56Q9NY93 Z82188.1-201ENST00000436709 154 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.07□□□□□ -1.92
DDX56Q9NY93 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.07□□□□□ -1.92
DDX56Q9NY93 AC008885.1-201ENST00000514930 301 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 RNU5F-4P-201ENST00000516581 114 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 SNRPGP17-201ENST00000603780 214 ntBASIC3.07□□□□□ -1.92
DDX56Q9NY93 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX56Q9NY93 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.06□□□□□ -1.92
DDX56Q9NY93 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
DDX56Q9NY93 Y_RNA.315-201ENST00000365117 102 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 Y_RNA.319-201ENST00000365138 92 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 SNORA9.2-201ENST00000365361 133 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
DDX56Q9NY93 Y_RNA.405-201ENST00000383979 100 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 Y_RNA.451-201ENST00000384200 100 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 U8.10-201ENST00000384260 133 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 Y_RNA.524-201ENST00000384564 100 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 Y_RNA.561-201ENST00000384694 100 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 AL353997.1-201ENST00000432936 108 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX56Q9NY93 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX56Q9NY93 AL035666.1-201ENST00000446195 348 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 AC245102.2-201ENST00000448956 180 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 RN7SL499P-201ENST00000481141 276 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 AC018868.1-201ENST00000491307 315 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 RN7SL504P-201ENST00000494496 287 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 RPS23P5-201ENST00000495419 428 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX56Q9NY93 RNU6-1153P-201ENST00000516760 105 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX56Q9NY93 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
DDX56Q9NY93 AL132822.1-201ENST00000617063 513 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 AC005562.2-201ENST00000618264 111 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
DDX56Q9NY93 AC131280.1-202ENST00000624067 4211 ntBASIC3.06□□□□□ -1.92
DDX56Q9NY93 MTND5P10-201ENST00000603719 1809 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
DDX56Q9NY93 RNU1-35P-201ENST00000362782 153 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 SNORA38.1-201ENST00000364172 131 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 MIR34B-201ENST00000385076 84 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 MIR670-201ENST00000390142 98 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 MTND1P14-201ENST00000427400 950 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.05□□□□□ -1.92
DDX56Q9NY93 AL139109.1-201ENST00000455491 297 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 MIR2053-201ENST00000459295 91 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 AC022493.2-201ENST00000506122 481 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 Y_RNA.701-201ENST00000516812 110 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX56Q9NY93 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX56Q9NY93 MIR5701-3-201ENST00000578890 82 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 MIR5701-1-201ENST00000585138 82 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
DDX56Q9NY93 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.05□□□□□ -1.92
DDX56Q9NY93 AC090115.4-201ENST00000609970 188 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 TCL6_2.1-201ENST00000615162 119 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms