Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC007395.1-201ENST00000451333 677 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 AC007547.1-201ENST00000462177 490 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 AL163973.1-201ENST00000484753 577 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 RPL36AP21-201ENST00000490372 323 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 RPL23AP94-201ENST00000512518 302 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 MTND4P7-201ENST00000523876 130 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 AP005136.1-201ENST00000579765 429 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.59□□□□□ -2.15
POLE3Q9NRF9 AC004223.2-201ENST00000590309 544 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 uc_338.34-201ENST00000617467 174 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 SNORA43.4-201ENST00000629559 138 ntBASIC1.59□□□□□ -2.15
POLE3Q9NRF9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.58□□□□□ -2.16
POLE3Q9NRF9 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 Y_RNA.159-201ENST00000363674 87 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 RNU6-996P-201ENST00000365438 107 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 RNU6-296P-201ENST00000384608 107 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 RNU6-1093P-201ENST00000391194 107 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 MTCO2P3-201ENST00000442543 421 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 ATP5J2P3-201ENST00000451550 258 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.58□□□□□ -2.16
POLE3Q9NRF9 AC016925.1-201ENST00000458303 298 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 AC069114.2-201ENST00000604699 304 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
POLE3Q9NRF9 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.58□□□□□ -2.16
POLE3Q9NRF9 AC068205.3-201ENST00000636385 468 ntBASIC1.58□□□□□ -2.16
POLE3Q9NRF9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 RNU6-862P-201ENST00000362804 105 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 MIR520A-201ENST00000384862 85 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 SNORD73A-201ENST00000386062 65 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 SNORA40.18-201ENST00000391200 128 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC068050.1-201ENST00000394891 380 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 PPP1R2P5-201ENST00000457256 603 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 RNU7-180P-201ENST00000459240 63 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 RNU7-138P-201ENST00000459479 64 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 RPL9P9-202ENST00000466501 579 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC114801.2-201ENST00000503825 781 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 SNORD60.2-201ENST00000516883 86 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 MIR4528-201ENST00000577763 90 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC009994.1-201ENST00000606889 253 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC005520.5-201ENST00000613926 164 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC005609.4-201ENST00000625071 447 ntBASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.57□□□□□ -2.16
POLE3Q9NRF9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 RNU1-76P-201ENST00000362903 159 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 RNU5A-6P-201ENST00000384136 116 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 RNA5SP219-201ENST00000390940 113 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AL049545.1-201ENST00000401856 572 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AL606923.1-201ENST00000406616 190 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AC073464.1-201ENST00000429823 534 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 USP9YP28-201ENST00000435142 589 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AL121601.2-201ENST00000438019 707 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 USP9YP29-201ENST00000445112 563 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 ARL2BPP4-201ENST00000506854 471 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 RPL39P5-202ENST00000512505 151 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 Y_RNA.695-201ENST00000516715 107 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.56□□□□□ -2.16
POLE3Q9NRF9 SNORA59B-202ENST00000578183 701 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AC013412.1-201ENST00000610687 192 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AL354950.2-201ENST00000617939 290 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 MIR8063-201ENST00000621930 81 ntBASIC1.56□□□□□ -2.16
POLE3Q9NRF9 AC010615.1-201ENST00000594254 1764 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 RNU6-271P-201ENST00000363858 105 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 SNORA18.2-201ENST00000383865 132 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 RNU6-877P-201ENST00000383868 107 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 RNU6-348P-201ENST00000384386 107 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 AC090960.1-201ENST00000421072 306 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 AC073415.1-201ENST00000449240 153 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 snoU13.30-201ENST00000458951 104 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 AC010531.2-201ENST00000465012 153 ntBASIC1.55□□□□□ -2.16
POLE3Q9NRF9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.55□□□□□ -2.16
POLE3Q9NRF9 AC090115.3-201ENST00000553218 849 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms