Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS16Q9H269 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS16Q9H269 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
VPS16Q9H269 RPL23AP78-201ENST00000599928 470 ntBASIC3.03□□□□□ -1.92
VPS16Q9H269 AC009314.1-201ENST00000603871 304 ntBASIC3.03□□□□□ -1.92
VPS16Q9H269 RNU6-91P-201ENST00000607774 107 ntBASIC3.03□□□□□ -1.92
VPS16Q9H269 uc_338.14-201ENST00000613162 166 ntBASIC3.03□□□□□ -1.92
VPS16Q9H269 AL162274.2-201ENST00000614406 332 ntBASIC3.03□□□□□ -1.92
VPS16Q9H269 AC002064.3-201ENST00000623448 346 ntBASIC3.03□□□□□ -1.92
VPS16Q9H269 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
VPS16Q9H269 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS16Q9H269 Y_RNA.152-201ENST00000363578 100 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 RNU6-487P-201ENST00000365430 104 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS16Q9H269 Y_RNA.483-201ENST00000384380 101 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 RPS29P13-201ENST00000402041 169 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 RNU6-1245P-201ENST00000411130 106 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS16Q9H269 RPS3AP12-201ENST00000443616 753 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
VPS16Q9H269 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS16Q9H269 RPL31P41-201ENST00000477967 372 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AC093852.1-201ENST00000503587 266 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AC083906.5-201ENST00000503722 328 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 MTND1P19-201ENST00000511780 315 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 RNU6-1143P-201ENST00000516125 104 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 RNU2-53P-201ENST00000516257 147 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 RNY3P15-201ENST00000516297 97 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 SCARNA13-201ENST00000516672 275 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AP005902.1-201ENST00000521358 186 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AC103996.1-201ENST00000555468 102 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AC090517.1-201ENST00000569307 266 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 MIR5696-201ENST00000578474 85 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS16Q9H269 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 HMGB1P24-202ENST00000615653 685 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AL138825.1-201ENST00000618587 192 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS16Q9H269 AC078938.1-201ENST00000620993 318 ntBASIC3.02□□□□□ -1.93
VPS16Q9H269 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
VPS16Q9H269 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 Y_RNA.64-201ENST00000362845 102 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 RNU6-428P-201ENST00000362942 107 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 RNU6-105P-201ENST00000363909 104 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 Y_RNA.257-201ENST00000364596 102 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 Y_RNA.276-201ENST00000364732 109 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 Y_RNA.461-201ENST00000384263 103 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 RNU6-933P-201ENST00000384424 107 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 SNORA48.5-201ENST00000391143 135 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS16Q9H269 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 MTCO3P8-201ENST00000453691 755 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 SEM1P1-201ENST00000506694 209 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 MRPS36P2-201ENST00000512569 299 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS16Q9H269 AC004584.2-201ENST00000570407 410 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS16Q9H269 VN1R91P-201ENST00000594377 169 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS16Q9H269 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.01□□□□□ -1.93
VPS16Q9H269 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS16Q9H269 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
VPS16Q9H269 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS16Q9H269 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS16Q9H269 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS16Q9H269 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3□□□□□ -1.93
VPS16Q9H269 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
VPS16Q9H269 SNORD56.1-201ENST00000362913 68 ntBASIC3□□□□□ -1.93
VPS16Q9H269 SNORD50.1-201ENST00000362987 71 ntBASIC3□□□□□ -1.93
VPS16Q9H269 RNU6-595P-201ENST00000363944 107 ntBASIC3□□□□□ -1.93
VPS16Q9H269 RNA5SP387-201ENST00000364226 106 ntBASIC3□□□□□ -1.93
VPS16Q9H269 RNU6-336P-201ENST00000364891 107 ntBASIC3□□□□□ -1.93
VPS16Q9H269 Y_RNA.333-201ENST00000365274 102 ntBASIC3□□□□□ -1.93
VPS16Q9H269 Y_RNA.551-201ENST00000384661 102 ntBASIC3□□□□□ -1.93
VPS16Q9H269 MIR521-1-201ENST00000384902 87 ntBASIC3□□□□□ -1.93
VPS16Q9H269 U3.26-201ENST00000391236 204 ntBASIC3□□□□□ -1.93
VPS16Q9H269 RNA5SP390-201ENST00000410191 113 ntBASIC3□□□□□ -1.93
VPS16Q9H269 EEF1A1P41-201ENST00000414667 207 ntBASIC3□□□□□ -1.93
VPS16Q9H269 RAB6C-AS1-202ENST00000433431 123 ntBASIC3□□□□□ -1.93
VPS16Q9H269 AC004383.1-201ENST00000438135 289 ntBASIC3□□□□□ -1.93
VPS16Q9H269 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3□□□□□ -1.93
VPS16Q9H269 FCF1P4-201ENST00000448326 183 ntBASIC3□□□□□ -1.93
VPS16Q9H269 SNORD127-201ENST00000458892 86 ntBASIC3□□□□□ -1.93
VPS16Q9H269 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3□□□□□ -1.93
VPS16Q9H269 SNORA25.11-201ENST00000515935 105 ntBASIC3□□□□□ -1.93
VPS16Q9H269 RNU7-4P-201ENST00000516961 62 ntBASIC3□□□□□ -1.93
VPS16Q9H269 SNORA31.23-201ENST00000517219 133 ntBASIC3□□□□□ -1.93
VPS16Q9H269 SNORA70.24-201ENST00000517233 118 ntBASIC3□□□□□ -1.93
VPS16Q9H269 AC011471.1-201ENST00000585766 187 ntBASIC3□□□□□ -1.93
VPS16Q9H269 AC019159.1-201ENST00000605094 187 ntBASIC3□□□□□ -1.93
VPS16Q9H269 AC096772.1-201ENST00000609146 564 ntBASIC3□□□□□ -1.93
VPS16Q9H269 AC024581.2-201ENST00000619986 252 ntBASIC3□□□□□ -1.93
VPS16Q9H269 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3□□□□□ -1.93
VPS16Q9H269 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS16Q9H269 ZNF299P-201ENST00000406845 1804 ntBASIC3□□□□□ -1.93
VPS16Q9H269 ANKRD18EP-201ENST00000405487 2632 ntBASIC3□□□□□ -1.93
VPS16Q9H269 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS16Q9H269 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS16Q9H269 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms