Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 RPL23AP70-201ENST00000483361 460 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-561P-201ENST00000516222 102 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 RN7SL600P-201ENST00000581811 299 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 MIR486-1-201ENST00000612171 68 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 MIR7151-201ENST00000617477 60 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-235P-201ENST00000362644 107 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-335P-201ENST00000364563 113 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-1264P-201ENST00000383891 107 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 AL031003.1-201ENST00000404229 172 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 HSPE1P13-201ENST00000451143 297 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 SNORA31.16-201ENST00000516773 139 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 CKS1BP7-201ENST00000522230 235 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 AL356575.1-201ENST00000603008 283 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 AL591034.3-201ENST00000605511 685 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 RNA5SP108-201ENST00000605921 117 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 FTX_3.1-201ENST00000610451 147 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 AL591424.2-201ENST00000617023 128 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 U6.98-201ENST00000637157 84 ntBASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUCKS1Q9H1E3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 SNORD115-30-201ENST00000364117 82 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 Y_RNA.393-201ENST00000383936 102 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RNU1-73P-201ENST00000383971 164 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 SNORA18.3-201ENST00000384122 132 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 Y_RNA.521-201ENST00000384560 114 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 SNORA40.5-201ENST00000391061 128 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RPS26P8-201ENST00000393490 348 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RNA5SP317-201ENST00000410176 116 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RNA5SP311-201ENST00000411290 116 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 AL500522.2-201ENST00000448562 343 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 snoU13.24-201ENST00000458998 104 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RN7SL330P-201ENST00000469709 307 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RPS4XP13-201ENST00000483219 789 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RN7SL604P-201ENST00000492589 296 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 AC026726.1-201ENST00000512859 601 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-772P-201ENST00000516042 105 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RNA5SP315-201ENST00000516340 116 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 RNA5SP312-201ENST00000517068 116 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 MIR5582-201ENST00000579697 68 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 AC012640.5-201ENST00000623897 319 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 MIR3529-201ENST00000637713 78 ntBASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUCKS1Q9H1E3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NUCKS1Q9H1E3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NUCKS1Q9H1E3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.72
NUCKS1Q9H1E3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 Y_RNA.229-201ENST00000364347 113 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 Y_RNA.415-201ENST00000384012 112 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 AL606845.1-201ENST00000404881 255 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 RPL39P29-201ENST00000447779 157 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 RPS27P1-201ENST00000450552 247 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 RPL26P9-201ENST00000457466 433 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 AP000873.1-201ENST00000463987 400 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 SNORA31.8-201ENST00000516327 108 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 Y_RNA.694-201ENST00000516677 117 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-1231P-201ENST00000517185 103 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 MIR3186-201ENST00000577404 85 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 AC068724.3-201ENST00000625906 87 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 MIR492-201ENST00000638676 116 ntBASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NUCKS1Q9H1E3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-1228P-201ENST00000391014 107 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 SNORA75.5-201ENST00000391291 81 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 AC019205.3-201ENST00000424573 156 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 AC083863.1-201ENST00000438811 231 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 RPL37P4-201ENST00000448908 268 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms