Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU1-18P-201ENST00000363062 164 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 RNU6-944P-201ENST00000364023 107 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 RNU6-1310P-201ENST00000384153 107 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 RNU6-220P-201ENST00000390919 107 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 RNU2-32P-201ENST00000411193 191 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 CYCSP4-201ENST00000429682 331 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 AC074290.1-201ENST00000448883 135 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 RPS29P2-201ENST00000479278 136 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 AC110768.1-201ENST00000509222 400 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 RAC1P2-201ENST00000511164 579 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 AC018630.3-201ENST00000542637 96 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 U4.1-201ENST00000620349 87 ntBASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAIPQ9BWF2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 LINC02555-201ENST00000563933 1951 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 SNORD46.1-201ENST00000364139 104 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 MIR561-201ENST00000385216 97 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 MIR1302-6-201ENST00000408466 90 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 RNU5A-5P-201ENST00000411054 116 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 PRSS3P4-201ENST00000453323 162 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 RNU7-14P-201ENST00000459331 62 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 RN7SKP282-201ENST00000516824 299 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 RRN3P3-201ENST00000549207 578 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 AC244205.2-202ENST00000635781 342 ntBASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRAIPQ9BWF2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 RNU6-234P-201ENST00000365229 104 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 MIR183-201ENST00000384958 110 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 RNA5SP424-201ENST00000390988 115 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 AL390729.2-201ENST00000416137 156 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 MIR449C-201ENST00000516047 92 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 SNORA48.11-201ENST00000517015 89 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 AC233702.2-202ENST00000562547 291 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 AC068205.3-201ENST00000636385 468 ntBASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAIPQ9BWF2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 RNU6-438P-201ENST00000365561 103 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 MIR300-201ENST00000401138 83 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 RNA5SP475-201ENST00000410568 110 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 RNU6-130P-201ENST00000411112 103 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 AC092427.1-202ENST00000430569 476 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 AC104619.4-201ENST00000510773 249 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 RNU6-1098P-201ENST00000516772 96 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 AC018448.1-201ENST00000552843 316 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 TGIF1P1-201ENST00000558095 802 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 MIR3149-201ENST00000584629 83 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 AC084757.4-201ENST00000616350 526 ntBASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.05□□□□□ -1.76
TRAIPQ9BWF2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 RNU6-626P-201ENST00000363354 107 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 Y_RNA.462-201ENST00000384268 102 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AL357075.1-201ENST00000404107 726 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 RPS29P4-201ENST00000414733 161 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC096920.1-201ENST00000423991 241 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC009969.1-201ENST00000438726 172 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC114982.1-201ENST00000469402 321 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC117440.1-201ENST00000474107 571 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC091826.1-201ENST00000514065 313 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 RNU6-965P-201ENST00000516721 96 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 RNU6-1231P-201ENST00000517185 103 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AP003733.2-201ENST00000529409 171 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC022616.8-201ENST00000533569 253 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 MIR4753-201ENST00000585119 83 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC005176.2-201ENST00000596933 147 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 U3.45-201ENST00000607547 219 ntBASIC4.04□□□□□ -1.76
TRAIPQ9BWF2 AC004832.5-201ENST00000608677 401 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms