Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU6-880P-201ENST00000384526 107 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RNU6-12P-201ENST00000384604 107 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RNU6-41P-201ENST00000384741 107 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 Y_RNA.587-201ENST00000391210 103 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 MIR300-201ENST00000401138 83 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 NDUFB4P4-201ENST00000404822 243 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 MIR1302-4-201ENST00000408701 150 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 Y_RNA.617-201ENST00000410920 90 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 AL121890.1-201ENST00000435457 205 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 HMGN2P9-201ENST00000476875 229 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RPL23AP54-201ENST00000495129 419 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RNU6-1299P-201ENST00000516316 100 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RNU6-126P-201ENST00000516685 103 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RN7SKP289-201ENST00000517244 295 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 HSPE1P18-201ENST00000517602 280 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 AL031274.2-201ENST00000599419 203 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 AC097639.2-201ENST00000603159 172 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-CQ95604 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 AC010889.1-201ENST00000566193 2666 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-CQ95604 LINC01355-201ENST00000566551 5444 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-CQ95604 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-CQ95604 AC016588.2-201ENST00000632484 3021 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-CQ95604 AC009487.4-201ENST00000624969 3585 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-CQ95604 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-CQ95604 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-CQ95604 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-CQ95604 Y_RNA.124-201ENST00000363339 93 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 SNORA51.4-201ENST00000364993 124 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 Y_RNA.346-201ENST00000365385 112 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
HLA-CQ95604 AL135786.1-201ENST00000415892 214 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 AL157831.1-201ENST00000426134 473 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-CQ95604 snoU13.28-201ENST00000459235 104 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 RNU6-1061P-201ENST00000516530 99 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 RNU6-844P-201ENST00000517175 102 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-CQ95604 RPL30P11-203ENST00000598995 310 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 RNU1-30P-201ENST00000606575 163 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 AC009093.8-201ENST00000641769 292 ntBASIC4.53□□□□□ -1.68
HLA-CQ95604 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HLA-CQ95604 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-CQ95604 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HLA-CQ95604 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-CQ95604 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-CQ95604 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-CQ95604 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-CQ95604 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-CQ95604 RNA5SP175-201ENST00000364275 119 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 RNU4-41P-201ENST00000364426 143 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 AL355796.1-201ENST00000406706 323 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 RN7SKP16-201ENST00000410180 299 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 AC010598.1-201ENST00000510378 103 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 AC005868.1-201ENST00000536421 331 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 AC006349.1-201ENST00000555526 235 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 RPL23AP97-201ENST00000568955 471 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 HSPE1P7-201ENST00000604681 321 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HLA-CQ95604 MIR6500-201ENST00000622700 86 ntBASIC4.52□□□□□ -1.69
HLA-CQ95604 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-CQ95604 UBE3AP2-201ENST00000429033 2259 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 AC011266.1-201ENST00000624119 3569 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-CQ95604 Y_RNA.369-201ENST00000365568 117 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 SNORD116-13-201ENST00000384408 92 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-CQ95604 RNU6-750P-201ENST00000390946 107 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 SNORA26-201ENST00000391286 122 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 RPS29P24-201ENST00000486345 171 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-CQ95604 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-CQ95604 AL138880.2-201ENST00000616214 239 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 AL121890.5-201ENST00000620848 304 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 AC006435.5-201ENST00000624486 112 ntBASIC4.51□□□□□ -1.69
HLA-CQ95604 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-CQ95604 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-CQ95604 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-CQ95604 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-CQ95604 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-CQ95604 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-CQ95604 AC002546.1-201ENST00000588041 2504 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-CQ95604 AC007256.1-201ENST00000392253 2765 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-CQ95604 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-CQ95604 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-CQ95604 AC010680.1-201ENST00000590024 3590 ntBASIC4.5□□□□□ -1.69
HLA-CQ95604 Y_RNA.35-201ENST00000362601 101 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms