Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNA5SP124-201ENST00000362739 110 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 Y_RNA.145-201ENST00000363527 102 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 RNU6-944P-201ENST00000364023 107 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 SNORD56.5-201ENST00000364281 72 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 RNU4-50P-201ENST00000364361 141 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 SNORA18.2-201ENST00000383865 132 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 SNORA51.11-201ENST00000384442 131 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 Y_RNA.527-201ENST00000384573 102 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 MIR218-2-201ENST00000385006 110 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 MIR549A-201ENST00000385268 96 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 RNU6-985P-201ENST00000410182 104 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 CYCSP19-201ENST00000411715 316 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 RPS3AP12-201ENST00000443616 753 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.55□□□□□ -2
NPIPB3Q92617 RNU6-327P-201ENST00000516270 127 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 RNU6-1045P-201ENST00000516321 107 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 RNU6-764P-201ENST00000516396 105 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 AC245166.1-201ENST00000521012 253 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.55□□□□□ -2
NPIPB3Q92617 AC125232.2-201ENST00000592457 143 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 AC124312.5-201ENST00000604451 268 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 AL355297.2-201ENST00000604792 129 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 AL034408.1-202ENST00000636088 415 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 AL356274.2-201ENST00000624379 3752 ntBASIC2.55□□□□□ -2
NPIPB3Q92617 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NPIPB3Q92617 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPIPB3Q92617 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
NPIPB3Q92617 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPB3Q92617 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPB3Q92617 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RNU1-62P-201ENST00000362599 164 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RNA5SP119-201ENST00000362715 117 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RNU1-76P-201ENST00000362903 159 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RNU6-26P-201ENST00000383985 107 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 SNORA18.3-201ENST00000384122 132 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RNU6-823P-201ENST00000391042 103 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RNU6ATAC-201ENST00000408749 126 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RNU2-25P-201ENST00000411041 191 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 MTND2P23-201ENST00000422990 651 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 YME1L1P1-201ENST00000429435 297 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 AC009969.1-201ENST00000438726 172 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.54□□□□□ -2
NPIPB3Q92617 AC004386.2-201ENST00000441858 148 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RPS29P2-201ENST00000479278 136 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.54□□□□□ -2
NPIPB3Q92617 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 RN7SKP49-201ENST00000516675 260 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.54□□□□□ -2
NPIPB3Q92617 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.54□□□□□ -2
NPIPB3Q92617 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
NPIPB3Q92617 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.54□□□□□ -2
NPIPB3Q92617 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.54□□□□□ -2
NPIPB3Q92617 MIR4276-201ENST00000584832 70 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 AL390123.1-201ENST00000603216 237 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 AC010999.1-201ENST00000611856 324 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPB3Q92617 AC093010.3-201ENST00000570269 15214 ntBASIC2.54□□□□□ -2
NPIPB3Q92617 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
NPIPB3Q92617 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPIPB3Q92617 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.53□□□□□ -2
NPIPB3Q92617 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
NPIPB3Q92617 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.53□□□□□ -2
NPIPB3Q92617 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPIPB3Q92617 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.53□□□□□ -2
NPIPB3Q92617 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.53□□□□□ -2
NPIPB3Q92617 Y_RNA.179-201ENST00000363844 90 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 SNORA63.7-201ENST00000365579 123 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 Y_RNA.380-201ENST00000365663 111 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 DYNLT3P1-201ENST00000378574 347 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 RNU6-546P-201ENST00000383991 107 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 RNU6-793P-201ENST00000384233 104 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 SNORD78.2-201ENST00000391076 69 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 RN7SKP202-201ENST00000410439 330 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 RNA5SP229-201ENST00000410809 99 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 RNU6-1001P-201ENST00000411265 100 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.53□□□□□ -2
NPIPB3Q92617 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 AC009237.7-201ENST00000447357 229 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.53□□□□□ -2
NPIPB3Q92617 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.53□□□□□ -2
NPIPB3Q92617 AC108043.1-201ENST00000512696 574 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 RNU6-1137P-201ENST00000517073 99 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 SNORA31.26-201ENST00000517250 137 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPIPB3Q92617 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.53□□□□□ -2
NPIPB3Q92617 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.53□□□□□ -2
NPIPB3Q92617 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.53□□□□□ -2
NPIPB3Q92617 MIR5006-201ENST00000583027 110 ntBASIC2.53□□□□□ -2
NPIPB3Q92617 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPIPB3Q92617 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPIPB3Q92617 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NPIPB3Q92617 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPB3Q92617 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPB3Q92617 RNA5SP361-201ENST00000362686 118 ntBASIC2.52□□□□□ -2.01
NPIPB3Q92617 RNA5SP125-201ENST00000364843 120 ntBASIC2.52□□□□□ -2.01
NPIPB3Q92617 RNU6-318P-201ENST00000384283 103 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms