Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC007656.2-201ENST00000624902 4547 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 Y_RNA.163-201ENST00000363702 113 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 Y_RNA.634-201ENST00000364811 113 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 DYNLT3P1-201ENST00000378574 347 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AL133475.1-201ENST00000404414 305 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AL355796.1-201ENST00000406706 323 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 EDDM3CP-201ENST00000415977 425 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 HMGN2P21-201ENST00000447764 270 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AL021397.1-201ENST00000451806 248 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 RN7SL812P-201ENST00000493791 279 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 SNORA18.4-201ENST00000516440 124 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 RPL23AP97-201ENST00000568955 471 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 RPS15AP11-201ENST00000594193 385 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AC113403.1-201ENST00000604910 193 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AC009831.4-201ENST00000620744 325 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SCUBE3Q8IX30 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.59□□□□□ -1.68
SCUBE3Q8IX30 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 AC087190.4-201ENST00000574616 8334 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RNU6-1010P-201ENST00000362757 107 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RNA5SP22-201ENST00000365393 109 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 SNORD12C-201ENST00000386307 89 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RNA5SP171-201ENST00000391071 115 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RPL23AP52-201ENST00000439311 478 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RPS3P1-201ENST00000456781 192 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RPL23AP62-201ENST00000463396 453 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 AC084357.1-201ENST00000473404 255 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 AC091167.1-201ENST00000492017 396 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 RNU6-91P-201ENST00000607774 107 ntBASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCUBE3Q8IX30 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 RNU1-94P-201ENST00000362627 173 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 RNA5SP175-201ENST00000364275 119 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 RNA5SP173-201ENST00000364857 136 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 Y_RNA.528-201ENST00000384575 108 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 MIR586-201ENST00000385035 97 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 MIR1911-201ENST00000410783 80 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 AC009237.10-201ENST00000414112 510 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 AL445584.1-201ENST00000431451 330 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 RNU6-970P-201ENST00000516312 107 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 HSPE1P18-201ENST00000517602 280 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 IGKV1-22-201ENST00000524313 326 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 MIR3138-201ENST00000585238 82 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 AC097639.2-201ENST00000603159 172 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 AC093732.2-201ENST00000607950 274 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 AC112200.1-201ENST00000625015 234 ntBASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCUBE3Q8IX30 Y_RNA.52-201ENST00000362760 96 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 RNU6-271P-201ENST00000363858 105 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 U3.15-201ENST00000365398 212 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 RPS26P8-201ENST00000393490 348 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 HSPE1P12-201ENST00000412576 301 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 AL645939.1-201ENST00000453429 797 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 RNU1-104P-201ENST00000517280 175 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 TRAV8-5-201ENST00000537369 341 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 RPL17P51-201ENST00000605218 238 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 AL138721.1-201ENST00000616756 179 ntBASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCUBE3Q8IX30 AC010733.2-201ENST00000589496 5702 ntBASIC4.55□□□□□ -1.68
SCUBE3Q8IX30 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
SCUBE3Q8IX30 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCUBE3Q8IX30 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCUBE3Q8IX30 SNORA27.1-201ENST00000362604 124 ntBASIC4.55□□□□□ -1.68
SCUBE3Q8IX30 Y_RNA.91-201ENST00000363042 107 ntBASIC4.55□□□□□ -1.68
SCUBE3Q8IX30 RNU6-1113P-201ENST00000384348 107 ntBASIC4.55□□□□□ -1.68
SCUBE3Q8IX30 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms