Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LYSMD3Q7Z3D4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LYSMD3Q7Z3D4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.23□□□□□ -1.73
LYSMD3Q7Z3D4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 Y_RNA.116-201ENST00000363292 103 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 MIR1179-201ENST00000408703 91 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 AL365496.1-201ENST00000426885 215 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 MRPL49P2-201ENST00000521066 465 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 EIF4A1P12-201ENST00000551910 141 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 AC074050.1-201ENST00000563247 211 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 AC024220.1-201ENST00000603675 484 ntBASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LYSMD3Q7Z3D4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LYSMD3Q7Z3D4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.21□□□□□ -1.73
LYSMD3Q7Z3D4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RNA5SP502-201ENST00000362694 119 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RNU6-978P-201ENST00000364371 103 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 SNORD73B-201ENST00000364394 72 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 SNORA18.2-201ENST00000383865 132 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 SNORA67.2-201ENST00000384300 149 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RNU6-880P-201ENST00000384526 107 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RN7SKP27-201ENST00000410684 333 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 AC006028.1-201ENST00000438379 402 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RPS29P2-201ENST00000479278 136 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RNU2-60P-201ENST00000517290 128 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RPL30P11-203ENST00000598995 310 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 VN1R85P-201ENST00000601587 426 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 uc_338.28-201ENST00000612082 187 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 AC010733.2-201ENST00000589496 5702 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 AL513302.2-201ENST00000562313 1842 ntBASIC4.21□□□□□ -1.74
LYSMD3Q7Z3D4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 U3.8-201ENST00000363675 217 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 MIR548A1-201ENST00000385041 97 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 MIR708-201ENST00000390708 88 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 Y_RNA.617-201ENST00000410920 90 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AL139281.1-201ENST00000422120 335 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 RPL23AP46-201ENST00000438548 490 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 HMGN2P21-201ENST00000447764 270 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AC099522.1-202ENST00000514718 367 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AC105137.2-201ENST00000569073 466 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AC022655.2-201ENST00000577280 318 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 ZYXP1-201ENST00000617638 118 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 MIR8059-201ENST00000620427 81 ntBASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.2□□□□□ -1.74
LYSMD3Q7Z3D4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 AP002088.1-201ENST00000382740 395 ntBASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 U8.12-201ENST00000384701 133 ntBASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 Y_RNA.587-201ENST00000391210 103 ntBASIC4.19□□□□□ -1.74
LYSMD3Q7Z3D4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms