Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
KCNIP4Q6PIL6 AC121333.1-201ENST00000567488 2709 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 Y_RNA.378-201ENST00000365652 113 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 MIR208B-201ENST00000401172 77 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-648P-201ENST00000410190 107 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AL663109.1-201ENST00000411498 844 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 RPS20P15-201ENST00000412792 311 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 MTCO1P20-201ENST00000425366 358 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 C8orf59P1-201ENST00000429930 303 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AL357134.1-201ENST00000445848 426 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC007395.1-201ENST00000451333 677 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 RNU7-14P-201ENST00000459331 62 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC097473.1-201ENST00000508142 408 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 FAM206BP-201ENST00000510179 541 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 RPL39P5-202ENST00000512505 151 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC025465.4-201ENST00000513422 638 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 RNU5F-4P-201ENST00000516581 114 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 SNORD60.2-201ENST00000516883 86 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AP005136.1-201ENST00000579765 429 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 MIR5692C1-201ENST00000585309 91 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 AL033523.1-201ENST00000605153 153 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 RN7SKP299-201ENST00000606679 301 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.49□□□□□ -2.17
KCNIP4Q6PIL6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-562P-201ENST00000362731 107 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-438P-201ENST00000365561 103 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 Y_RNA.481-201ENST00000384373 102 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNY3P9-201ENST00000384727 106 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNA5SP425-201ENST00000410336 112 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 AC027124.2-201ENST00000428249 105 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 AC099677.2-201ENST00000436385 175 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 UBE2V1P8-201ENST00000437166 265 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 PPP1R2P5-201ENST00000457256 603 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-1208P-201ENST00000459588 107 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RPL9P6-201ENST00000492764 598 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RPL23AP63-201ENST00000498752 471 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-856P-201ENST00000516959 98 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-323P-201ENST00000521915 107 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 CPDP1-201ENST00000579660 283 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 MIR3618-201ENST00000580330 88 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 AC092747.3-201ENST00000603769 301 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 MIR8074-201ENST00000615081 81 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 AC068205.3-201ENST00000636385 468 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 MTND5P26-201ENST00000426018 1752 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 AC009541.1-201ENST00000438279 2662 ntBASIC1.48□□□□□ -2.17
KCNIP4Q6PIL6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 SNORA69-201ENST00000383895 132 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 SNORA29-201ENST00000384183 140 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 ARL5AP1-201ENST00000418991 388 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AL359672.1-201ENST00000442302 409 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 RPL9P9-202ENST00000466501 579 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 RPS23P5-201ENST00000495419 428 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AC025465.3-201ENST00000510570 311 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AC067942.3-201ENST00000512025 362 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 RNU6-405P-201ENST00000516637 110 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 SUMO2P18-201ENST00000518873 252 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AC026464.5-201ENST00000562497 722 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AC090517.1-201ENST00000569307 266 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AC100830.2-201ENST00000581636 240 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AL353149.1-201ENST00000610667 244 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 AC068792.1-201ENST00000621354 417 ntBASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KCNIP4Q6PIL6 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
KCNIP4Q6PIL6 U3.12-201ENST00000364498 214 ntBASIC1.46□□□□□ -2.18
KCNIP4Q6PIL6 SNORA16.1-201ENST00000364597 132 ntBASIC1.46□□□□□ -2.18
KCNIP4Q6PIL6 XGY1-201ENST00000381172 446 ntBASIC1.46□□□□□ -2.18
KCNIP4Q6PIL6 RNU6-1286P-201ENST00000383871 107 ntBASIC1.46□□□□□ -2.18
KCNIP4Q6PIL6 Y_RNA.510-201ENST00000384511 114 ntBASIC1.46□□□□□ -2.18
KCNIP4Q6PIL6 MIR23A-201ENST00000385245 73 ntBASIC1.46□□□□□ -2.18
KCNIP4Q6PIL6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms