Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 AL136164.4-201ENST00000625013 2135 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 RNU6-799P-201ENST00000363567 107 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.584-201ENST00000391090 114 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 RNU6-710P-201ENST00000410424 105 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 AC244670.1-201ENST00000436879 112 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 AL158147.1-201ENST00000443970 75 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 RPL32P34-201ENST00000486380 400 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 RNU6-537P-201ENST00000517277 103 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 AC069240.1-201ENST00000548774 375 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.81□□□□□ -1.64
RC3H1Q5TC82 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RC3H1Q5TC82 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 MIR450A1-201ENST00000362262 91 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 RNU6-1205P-201ENST00000363625 106 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 RNU6-1082P-201ENST00000364574 107 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 RNA5SP235-201ENST00000365411 114 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 RNU6-1264P-201ENST00000383891 107 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 MIR549A-201ENST00000385268 96 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 MIR548A3-201ENST00000385297 97 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 SNORA26.3-201ENST00000391119 136 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.630-201ENST00000411370 108 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 RBMY2UP-201ENST00000453474 324 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 BX510359.1-201ENST00000456973 237 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 AC010469.1-201ENST00000463864 576 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 RN7SL601P-201ENST00000471221 293 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 VWA8P1-201ENST00000510889 176 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 RNU4-60P-201ENST00000517239 135 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 AC090142.3-201ENST00000519012 385 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 AC006199.1-201ENST00000548728 219 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 AC133485.4-201ENST00000561835 220 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 AC138907.4-201ENST00000570107 226 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 AL356575.1-201ENST00000603008 283 ntBASIC4.8□□□□□ -1.64
RC3H1Q5TC82 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RC3H1Q5TC82 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 U3.9-201ENST00000363823 204 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.280-201ENST00000364765 112 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.368-201ENST00000365547 113 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 AL031003.1-201ENST00000404229 172 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 RN7SKP177-201ENST00000410567 355 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 AL590383.1-201ENST00000428602 75 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 AL031737.1-201ENST00000450125 223 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 SNORA59A-201ENST00000459326 152 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 SNORD108-201ENST00000459332 71 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.692-201ENST00000516627 105 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 RN7SKP57-201ENST00000517248 293 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 AL133383.2-201ENST00000622958 2336 ntBASIC4.79□□□□□ -1.64
RC3H1Q5TC82 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RC3H1Q5TC82 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 SNORD115-30-201ENST00000364117 82 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 RNU6-597P-201ENST00000365620 102 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 RNU6-629P-201ENST00000384061 103 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 RNU4-43P-201ENST00000410628 137 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 CYCSP49-201ENST00000420810 319 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 SNRPGP5-201ENST00000456003 220 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 RPS29P2-201ENST00000479278 136 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 AC118273.1-201ENST00000525324 3006 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 AC004925.1-201ENST00000624256 2706 ntBASIC4.78□□□□□ -1.64
RC3H1Q5TC82 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RC3H1Q5TC82 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.77□□□□□ -1.65
RC3H1Q5TC82 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms