Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-16P-201ENST00000384385 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-393P-201ENST00000384475 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-15P-201ENST00000384534 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-1127P-201ENST00000384580 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-2-201ENST00000384627 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-29P-201ENST00000384637 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-9-201ENST00000384776 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-33P-201ENST00000384793 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
FOXF1Q12946 SNRPEP10-201ENST00000420249 274 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RPL31P35-201ENST00000431058 377 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 MTCO1P44-201ENST00000441935 243 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 KATNBL1P3-201ENST00000443475 909 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RPS29P28-201ENST00000446439 141 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AL356010.1-201ENST00000456364 102 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AL162395.1-201ENST00000457882 422 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 COX6CP14-201ENST00000469580 174 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.96□□□□□ -2.26
FOXF1Q12946 AC145146.1-201ENST00000496370 254 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC105417.1-201ENST00000514691 285 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.96□□□□□ -2.26
FOXF1Q12946 SUB1P4-201ENST00000566062 339 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-6P-201ENST00000606623 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 MIR98-201ENST00000606724 119 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC005520.5-201ENST00000613926 164 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC063943.3-201ENST00000615562 356 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC130454.1-201ENST00000622948 401 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 AC008993.2-201ENST00000631744 806 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
FOXF1Q12946 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
FOXF1Q12946 SNORD114-6-201ENST00000364393 72 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 RNU4-56P-201ENST00000364700 142 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 SNORD26-201ENST00000384147 75 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 MIR1-2-201ENST00000384961 85 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 RNU1-78P-201ENST00000391248 165 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
FOXF1Q12946 RNU2-29P-201ENST00000410423 189 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 RNU6-293P-201ENST00000411259 106 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.95□□□□□ -2.26
FOXF1Q12946 AC123900.1-201ENST00000420390 96 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
FOXF1Q12946 AC010975.2-201ENST00000427781 588 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC244670.1-201ENST00000436879 112 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.95□□□□□ -2.26
FOXF1Q12946 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.95□□□□□ -2.26
FOXF1Q12946 AC245517.4-201ENST00000448601 281 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AL133217.1-201ENST00000450980 425 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 ART2BP-201ENST00000453501 499 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.95□□□□□ -2.26
FOXF1Q12946 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.95□□□□□ -2.26
FOXF1Q12946 snoU13.9-201ENST00000458927 103 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC007547.1-201ENST00000462177 490 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 TOMM22P6-201ENST00000465035 409 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 RNU6-567P-201ENST00000516746 107 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 SNORA18.6-201ENST00000516792 115 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 RNA5SP490-201ENST00000517141 136 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC069113.1-201ENST00000517763 267 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AP002963.1-201ENST00000530590 184 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.95□□□□□ -2.26
FOXF1Q12946 Z94722.1-201ENST00000604328 474 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC104073.3-201ENST00000610942 955 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC097372.5-201ENST00000623665 376 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 AC005609.4-201ENST00000625071 447 ntBASIC0.95□□□□□ -2.26
FOXF1Q12946 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.95□□□□□ -2.26
FOXF1Q12946 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
FOXF1Q12946 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
FOXF1Q12946 MIR26B-201ENST00000362251 77 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 RNY1P10-201ENST00000363268 113 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 RNU1-22P-201ENST00000363334 158 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 RNU6-1303P-201ENST00000364841 107 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
FOXF1Q12946 RNU6-692P-201ENST00000384496 107 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 RNY3P10-201ENST00000384764 102 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 MIR513A1-201ENST00000385138 129 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 MT-TH-201ENST00000387441 69 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 SNORA16.2-201ENST00000390991 127 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AL049545.1-201ENST00000401856 572 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 RNU6-195P-201ENST00000411352 109 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.94□□□□□ -2.26
FOXF1Q12946 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXF1Q12946 MTND4P32-201ENST00000437189 1237 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 MTND2P4-201ENST00000445034 1004 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 PRPS1P1-201ENST00000445305 876 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXF1Q12946 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXF1Q12946 AC087477.1-201ENST00000465747 340 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AC016632.1-201ENST00000503994 196 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXF1Q12946 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXF1Q12946 RNVU1-2-201ENST00000516326 135 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 SNORD60.2-201ENST00000516883 86 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AC016256.1-201ENST00000547971 354 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.94□□□□□ -2.26
FOXF1Q12946 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms