Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MIR1302-3-201ENST00000408128 138 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.57□□□□□ -1.84
SSRP1Q08945 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.57□□□□□ -1.84
SSRP1Q08945 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.57□□□□□ -1.84
SSRP1Q08945 RPL21P2-201ENST00000440049 481 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 SCARNA17.1-201ENST00000516211 143 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 SCARNA17.2-201ENST00000516334 143 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 SCARNA13-201ENST00000516672 275 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 RNU6-58P-201ENST00000517143 103 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 AC245166.1-201ENST00000521012 253 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 COX6CP5-201ENST00000527162 228 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
SSRP1Q08945 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.57□□□□□ -1.84
SSRP1Q08945 AC103988.1-201ENST00000566382 2177 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
SSRP1Q08945 MIR3923-201ENST00000579521 83 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 SCARNA17.4-201ENST00000614296 143 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SSRP1Q08945 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSRP1Q08945 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSRP1Q08945 AP003122.5-201ENST00000527668 3766 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSRP1Q08945 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSRP1Q08945 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSRP1Q08945 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSRP1Q08945 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSRP1Q08945 SNORA46-201ENST00000384762 135 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 MIR487A-201ENST00000385009 80 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SSRP1Q08945 RNU6-159P-201ENST00000391080 106 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 RNU6-1109P-201ENST00000391187 107 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AL512633.1-201ENST00000399931 655 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.56□□□□□ -1.84
SSRP1Q08945 SDAD1P3-201ENST00000427380 333 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AC096638.1-201ENST00000444678 216 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.56□□□□□ -1.84
SSRP1Q08945 FCF1P4-201ENST00000448326 183 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.56□□□□□ -1.84
SSRP1Q08945 RPS27P29-201ENST00000463110 252 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 RPL31P41-201ENST00000477967 372 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 RNA5SP112-201ENST00000515937 99 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 RNA5SP54-201ENST00000516951 92 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 SCARNA11.3-201ENST00000517276 130 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.56□□□□□ -1.84
SSRP1Q08945 HSPE1P20-201ENST00000538133 289 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.56□□□□□ -1.84
SSRP1Q08945 RAC1P9-201ENST00000604990 392 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 YPEL5P2-201ENST00000605553 359 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AL121655.1-201ENST00000605811 308 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.56□□□□□ -1.84
SSRP1Q08945 AC005520.5-201ENST00000613926 164 ntBASIC3.56□□□□□ -1.84
SSRP1Q08945 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSRP1Q08945 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.56□□□□□ -1.84
SSRP1Q08945 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSRP1Q08945 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSRP1Q08945 OR56A5-201ENST00000340110 738 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 RNU6-1301P-201ENST00000362724 104 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 SET-203ENST00000372688 801 ntTSL 2 BASIC3.55□□□□□ -1.84
SSRP1Q08945 MIR10B-201ENST00000385011 110 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 RNA5SP213-201ENST00000391031 106 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 MIR208B-201ENST00000401172 77 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.55□□□□□ -1.84
SSRP1Q08945 RPS15AP7-201ENST00000439294 405 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 RPEP5-201ENST00000441137 268 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.55□□□□□ -1.84
SSRP1Q08945 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.55□□□□□ -1.84
SSRP1Q08945 SNORA25.11-201ENST00000515935 105 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 RNU2-53P-201ENST00000516257 147 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 AC090517.1-201ENST00000569307 266 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 MIR4503-201ENST00000582187 83 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.55□□□□□ -1.84
SSRP1Q08945 U6.92-201ENST00000636464 89 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSRP1Q08945 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.55□□□□□ -1.84
SSRP1Q08945 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
SSRP1Q08945 AC099654.7-201ENST00000635788 2127 ntBASIC3.55□□□□□ -1.84
SSRP1Q08945 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSRP1Q08945 RNU6-238P-201ENST00000363313 106 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 RNU6-879P-201ENST00000364328 108 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 RPL21P1-201ENST00000399532 476 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 CBX3P9-201ENST00000402326 552 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 RNA5SP274-201ENST00000410484 108 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 UQCRHP3-201ENST00000451503 251 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 RPL23AP70-201ENST00000483361 460 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 AC010469.2-201ENST00000496412 480 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 UBL5P4-201ENST00000562584 236 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.54□□□□□ -1.84
SSRP1Q08945 MIR5695-201ENST00000579717 85 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 AC103810.1-201ENST00000579873 453 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 AC008739.2-201ENST00000597006 317 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.54□□□□□ -1.84
SSRP1Q08945 AC005296.1-201ENST00000616145 209 ntBASIC3.54□□□□□ -1.84
SSRP1Q08945 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.54□□□□□ -1.84
SSRP1Q08945 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSRP1Q08945 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSRP1Q08945 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
SSRP1Q08945 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSRP1Q08945 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.53□□□□□ -1.84
SSRP1Q08945 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms