Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPS4XP62701 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.86□□□□□ -2.11
RPS4XP62701 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 RNA5SP160-201ENST00000364866 120 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 RNU6-128P-201ENST00000383976 107 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 Y_RNA.504-201ENST00000384481 104 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 MIR518A2-201ENST00000384966 87 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 MIR29C-201ENST00000385231 88 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 MIR764-201ENST00000390811 85 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS4XP62701 AL355497.1-201ENST00000406262 551 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 Y_RNA.615-201ENST00000410769 117 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 MTND1P23-201ENST00000416931 372 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS4XP62701 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPS4XP62701 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 IPO7P1-201ENST00000442031 636 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 GPM6BP3-201ENST00000442797 145 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.86□□□□□ -2.11
RPS4XP62701 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.86□□□□□ -2.11
RPS4XP62701 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS4XP62701 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS4XP62701 AC104564.1-201ENST00000493028 407 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 PTP4A1P4-201ENST00000512479 322 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 RNU6-567P-201ENST00000516746 107 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 MTND1P35-201ENST00000526739 508 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 AC121758.2-201ENST00000553271 193 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.86□□□□□ -2.11
RPS4XP62701 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.86□□□□□ -2.11
RPS4XP62701 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
RPS4XP62701 AC005520.5-201ENST00000613926 164 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.86□□□□□ -2.11
RPS4XP62701 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 AC068137.4-201ENST00000638485 296 ntBASIC1.86□□□□□ -2.11
RPS4XP62701 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPS4XP62701 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RPS4XP62701 AC009541.1-201ENST00000438279 2662 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AL596028.1-201ENST00000326971 197 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 RNU6-1159P-201ENST00000362933 107 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 SNORD113-7-201ENST00000363762 77 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 RNU6-1317P-201ENST00000364582 104 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 Y_RNA.373-201ENST00000365600 103 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 Y_RNA.450-201ENST00000384198 113 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 RNU6-1215P-201ENST00000384441 102 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 Y_RNA.530-201ENST00000384587 101 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RPS4XP62701 SNORA12-201ENST00000391162 147 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AL139156.1-201ENST00000412785 841 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 EIF1AXP1-201ENST00000419267 435 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS4XP62701 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS4XP62701 AC245102.2-201ENST00000448956 180 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AMD1P1-201ENST00000457220 922 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 TRBVA-201ENST00000498804 316 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AC114801.2-201ENST00000503825 781 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS4XP62701 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.85□□□□□ -2.11
RPS4XP62701 RNU6-1332P-201ENST00000516666 104 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 RNU6-548P-201ENST00000517083 115 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.85□□□□□ -2.11
RPS4XP62701 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.85□□□□□ -2.11
RPS4XP62701 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.85□□□□□ -2.11
RPS4XP62701 CYP4A27P-201ENST00000567218 190 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 CPDP1-201ENST00000579660 283 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.85□□□□□ -2.11
RPS4XP62701 Z98751.3-201ENST00000604447 521 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AP000654.2-201ENST00000605633 586 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 RMST_3.1-201ENST00000611651 109 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 PCGEM1.1-201ENST00000613431 131 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AL136221.1-201ENST00000621449 509 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 AC024614.3-201ENST00000637860 256 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 ZNF72P-201ENST00000425869 1908 ntBASIC1.85□□□□□ -2.11
RPS4XP62701 MTND4P1-201ENST00000457501 1466 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPS4XP62701 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RPS4XP62701 Y_RNA.100-201ENST00000363141 102 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 RNU6-26P-201ENST00000383985 107 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 SNORA6-201ENST00000384033 151 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 RNU6-332P-201ENST00000391193 108 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 RNU6-373P-201ENST00000411247 98 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 AL030996.1-201ENST00000411430 235 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.84□□□□□ -2.11
RPS4XP62701 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS4XP62701 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.84□□□□□ -2.11
RPS4XP62701 AC026371.1-201ENST00000551867 419 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.84□□□□□ -2.11
RPS4XP62701 AC002984.1-201ENST00000591692 448 ntBASIC1.84□□□□□ -2.11
RPS4XP62701 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.84□□□□□ -2.11
RPS4XP62701 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPS4XP62701 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPS4XP62701 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPS4XP62701 Y_RNA.89-201ENST00000363031 102 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 U3.9-201ENST00000363823 204 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 RNA5SP138-201ENST00000365098 114 ntBASIC1.83□□□□□ -2.12
RPS4XP62701 SNORD14D-201ENST00000384390 87 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms