Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 BX322639.1-202ENST00000423987 2213 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.6□□□□□ -1.83
NCKAP1LP55160 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
NCKAP1LP55160 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NCKAP1LP55160 PWAR6-201ENST00000552334 4618 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NCKAP1LP55160 RNU6-778P-201ENST00000363269 103 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCKAP1LP55160 RNU6-514P-201ENST00000384208 107 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NCKAP1LP55160 Y_RNA.580-201ENST00000391004 95 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 PTMAP5-201ENST00000393073 333 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 UBA52P6-201ENST00000399822 382 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 HSPE1P26-201ENST00000405341 275 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 AC007969.2-201ENST00000441891 191 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 AC006539.3-201ENST00000454258 129 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 AC097462.2-201ENST00000504623 481 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 RNU6-1219P-201ENST00000516143 112 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 RNU6-58P-201ENST00000517143 103 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.6□□□□□ -1.83
NCKAP1LP55160 RPL21P9-201ENST00000556149 474 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 AL162713.1-201ENST00000604480 262 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 AF127577.6-201ENST00000623352 2191 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.6□□□□□ -1.83
NCKAP1LP55160 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCKAP1LP55160 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.6□□□□□ -1.83
NCKAP1LP55160 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NCKAP1LP55160 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NCKAP1LP55160 Y_RNA.304-201ENST00000365011 112 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 RNU6-1175P-201ENST00000365200 107 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 RNU6-142P-201ENST00000384019 107 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AL357075.1-201ENST00000404107 726 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 RNA5SP120-201ENST00000410900 112 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 RNU6-1001P-201ENST00000411265 100 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 OOSP1P1-201ENST00000423265 274 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 WARS2P1-201ENST00000429678 537 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 SNRPGP3-201ENST00000469405 227 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AP005660.1-201ENST00000522972 293 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 CR383656.8-201ENST00000549046 145 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 HIGD1AP1-201ENST00000550979 275 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 MIR5692C2-201ENST00000577959 77 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 MIR3944-201ENST00000581277 108 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 AL078605.1-201ENST00000603529 500 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 FTX_3.1-201ENST00000610451 147 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AC024581.2-201ENST00000619986 252 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AC092628.2-201ENST00000622492 339 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 AC048347.1-201ENST00000624621 427 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 IGHVIII-44-202ENST00000636235 289 ntBASIC3.59□□□□□ -1.83
NCKAP1LP55160 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NCKAP1LP55160 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
NCKAP1LP55160 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NCKAP1LP55160 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKAP1LP55160 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NCKAP1LP55160 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKAP1LP55160 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 RNU6-217P-201ENST00000384164 104 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 RNU6-140P-201ENST00000384566 108 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 U3.19-201ENST00000390893 196 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 AL358075.3-201ENST00000426289 226 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 AC074133.1-201ENST00000515696 183 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 RNU6-1198P-201ENST00000516904 67 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.58□□□□□ -1.84
NCKAP1LP55160 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.58□□□□□ -1.84
NCKAP1LP55160 MIR2682-201ENST00000580305 110 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 AC104465.1-201ENST00000611365 139 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 MIR7112-201ENST00000616126 65 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 MIR6134-201ENST00000617606 109 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.58□□□□□ -1.84
NCKAP1LP55160 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.58□□□□□ -1.84
NCKAP1LP55160 AL079305.1-201ENST00000623159 3008 ntBASIC3.58□□□□□ -1.84
NCKAP1LP55160 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NCKAP1LP55160 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.58□□□□□ -1.84
NCKAP1LP55160 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NCKAP1LP55160 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NCKAP1LP55160 FTLP6-201ENST00000355274 422 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 MIR208A-201ENST00000362287 71 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 RNU6-923P-201ENST00000364753 107 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NCKAP1LP55160 RNU6-1181P-201ENST00000384191 106 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 RNU6-1117P-201ENST00000384525 104 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 RPL23AP36-201ENST00000413895 458 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 CST9LP2-201ENST00000437612 320 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.57□□□□□ -1.84
NCKAP1LP55160 MRPS10P1-201ENST00000448483 130 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 RNY3P16-201ENST00000516338 101 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 RNU6-1282P-201ENST00000516735 96 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 UBL5P4-201ENST00000562584 236 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 MIR5695-201ENST00000579717 85 ntBASIC3.57□□□□□ -1.84
NCKAP1LP55160 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.57□□□□□ -1.84
NCKAP1LP55160 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms