Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.02□□□□□ -1.77
CHRNA4P43681 RNU6-1146P-201ENST00000516282 102 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 Y_RNA.690-201ENST00000516603 95 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 AL121603.1-201ENST00000553815 142 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.02□□□□□ -1.77
CHRNA4P43681 AC007224.1-201ENST00000564410 144 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 CYP4A27P-201ENST00000567218 190 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.02□□□□□ -1.77
CHRNA4P43681 AC019159.1-201ENST00000605094 187 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA4P43681 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA4P43681 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA4P43681 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA4P43681 AL133412.1-201ENST00000380194 2992 ntBASIC4.02□□□□□ -1.77
CHRNA4P43681 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA4P43681 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
CHRNA4P43681 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA4P43681 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.01□□□□□ -1.77
CHRNA4P43681 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA4P43681 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.01□□□□□ -1.77
CHRNA4P43681 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CHRNA4P43681 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
CHRNA4P43681 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA4P43681 MIR372-201ENST00000362225 67 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 Z98749.2-208ENST00000381646 500 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 RNU1-13P-201ENST00000384499 162 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 RNA5SP104-201ENST00000410989 118 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.01□□□□□ -1.77
CHRNA4P43681 AL691449.1-201ENST00000426570 421 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 AC007919.1-201ENST00000429380 217 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 AL356867.1-201ENST00000429623 299 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 AL451050.1-201ENST00000450126 415 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.01□□□□□ -1.77
CHRNA4P43681 AC026402.1-201ENST00000513642 170 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.01□□□□□ -1.77
CHRNA4P43681 MIR92B-201ENST00000607575 96 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 AC034229.5-201ENST00000624258 185 ntBASIC4.01□□□□□ -1.77
CHRNA4P43681 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA4P43681 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA4P43681 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.01□□□□□ -1.77
CHRNA4P43681 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA4P43681 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CHRNA4P43681 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4□□□□□ -1.77
CHRNA4P43681 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CHRNA4P43681 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHRNA4P43681 RNA5SP502-201ENST00000362694 119 ntBASIC4□□□□□ -1.77
CHRNA4P43681 SNORD56.1-201ENST00000362913 68 ntBASIC4□□□□□ -1.77
CHRNA4P43681 Y_RNA.220-201ENST00000364244 109 ntBASIC4□□□□□ -1.77
CHRNA4P43681 Y_RNA.243-201ENST00000364481 109 ntBASIC4□□□□□ -1.77
CHRNA4P43681 SNORD18B-201ENST00000365659 72 ntBASIC4□□□□□ -1.77
CHRNA4P43681 SNORA18.3-201ENST00000384122 132 ntBASIC4□□□□□ -1.77
CHRNA4P43681 Y_RNA.544-201ENST00000384650 113 ntBASIC4□□□□□ -1.77
CHRNA4P43681 MIR153-1-201ENST00000384914 90 ntBASIC4□□□□□ -1.77
CHRNA4P43681 SNORA48.5-201ENST00000391143 135 ntBASIC4□□□□□ -1.77
CHRNA4P43681 MIR1251-201ENST00000408552 70 ntBASIC4□□□□□ -1.77
CHRNA4P43681 RNU6-383P-201ENST00000410864 94 ntBASIC4□□□□□ -1.77
CHRNA4P43681 RNA5SP39-201ENST00000411245 120 ntBASIC4□□□□□ -1.77
CHRNA4P43681 AC004552.1-201ENST00000419089 348 ntBASIC4□□□□□ -1.77
CHRNA4P43681 HMGB1P37-201ENST00000439613 609 ntBASIC4□□□□□ -1.77
CHRNA4P43681 RPL39P40-201ENST00000445481 146 ntBASIC4□□□□□ -1.77
CHRNA4P43681 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4□□□□□ -1.77
CHRNA4P43681 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4□□□□□ -1.77
CHRNA4P43681 SNRPGP8-201ENST00000454064 226 ntBASIC4□□□□□ -1.77
CHRNA4P43681 RPL23AP14-201ENST00000468281 468 ntBASIC4□□□□□ -1.77
CHRNA4P43681 RPS26P3-201ENST00000470205 348 ntBASIC4□□□□□ -1.77
CHRNA4P43681 AC090543.2-201ENST00000483963 348 ntBASIC4□□□□□ -1.77
CHRNA4P43681 AC004057.1-201ENST00000485827 348 ntBASIC4□□□□□ -1.77
CHRNA4P43681 RNU6-197P-201ENST00000516680 100 ntBASIC4□□□□□ -1.77
CHRNA4P43681 RNA5SP179-201ENST00000517284 121 ntBASIC4□□□□□ -1.77
CHRNA4P43681 SNORD84-203ENST00000584275 78 ntBASIC4□□□□□ -1.77
CHRNA4P43681 AC091167.4-201ENST00000605079 184 ntBASIC4□□□□□ -1.77
CHRNA4P43681 AL359198.2-201ENST00000611836 194 ntBASIC4□□□□□ -1.77
CHRNA4P43681 AL591424.2-201ENST00000617023 128 ntBASIC4□□□□□ -1.77
CHRNA4P43681 AC112484.5-201ENST00000624189 228 ntBASIC4□□□□□ -1.77
CHRNA4P43681 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHRNA4P43681 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CHRNA4P43681 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4□□□□□ -1.77
CHRNA4P43681 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.99□□□□□ -1.77
CHRNA4P43681 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CHRNA4P43681 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.99□□□□□ -1.77
CHRNA4P43681 AL133383.2-201ENST00000622958 2336 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHRNA4P43681 RNU6-173P-201ENST00000364215 104 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 Y_RNA.361-201ENST00000365515 120 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 MIR544A-201ENST00000384855 91 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 MIR549A-201ENST00000385268 96 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 SNORD12C-201ENST00000386307 89 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 AC244670.1-201ENST00000436879 112 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.99□□□□□ -1.77
CHRNA4P43681 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.99□□□□□ -1.77
CHRNA4P43681 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.99□□□□□ -1.77
CHRNA4P43681 RPL21P10-201ENST00000463521 490 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 RN7SL271P-201ENST00000487601 295 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 AC025445.1-201ENST00000502728 300 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.99□□□□□ -1.77
CHRNA4P43681 YPEL5P3-201ENST00000547227 352 ntBASIC3.99□□□□□ -1.77
CHRNA4P43681 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.99□□□□□ -1.77
CHRNA4P43681 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHRNA4P43681 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CHRNA4P43681 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms