Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL121655.1-201ENST00000605811 308 ntBASIC3.11□□□□□ -1.91
SLC6A4P31645 AL359198.2-201ENST00000611836 194 ntBASIC3.11□□□□□ -1.91
SLC6A4P31645 MIR7106-201ENST00000612419 65 ntBASIC3.11□□□□□ -1.91
SLC6A4P31645 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A4P31645 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SLC6A4P31645 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A4P31645 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC6A4P31645 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC6A4P31645 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A4P31645 RNU4-56P-201ENST00000364700 142 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 RNU6-702P-201ENST00000364982 107 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 SET-203ENST00000372688 801 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A4P31645 MIR767-201ENST00000390228 109 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 Y_RNA.618-201ENST00000410949 107 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 RPS26P42-201ENST00000413485 326 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A4P31645 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A4P31645 USP9YP16-201ENST00000430287 407 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 AL731563.1-201ENST00000442202 214 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 USP9YP23-201ENST00000455085 407 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A4P31645 RPL30P12-201ENST00000474666 353 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 RPS29P26-201ENST00000477483 171 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A4P31645 SNORA40.15-201ENST00000516884 107 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 uc_338.14-201ENST00000613162 166 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 SNORA50A-202ENST00000629536 136 ntBASIC3.1□□□□□ -1.91
SLC6A4P31645 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SLC6A4P31645 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A4P31645 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SLC6A4P31645 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A4P31645 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SLC6A4P31645 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A4P31645 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC6A4P31645 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A4P31645 SNORD114-19-201ENST00000363072 75 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 Y_RNA.471-201ENST00000384312 102 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 RNU1-139P-201ENST00000391307 165 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 SDAD1P3-201ENST00000427380 333 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 RN7SL429P-201ENST00000479090 223 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 RN7SL489P-201ENST00000486185 223 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 RN7SL327P-201ENST00000488659 223 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A4P31645 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A4P31645 SNORA25.11-201ENST00000515935 105 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 RNU6-1114P-201ENST00000516022 107 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 HSPE1P20-201ENST00000538133 289 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 AP002770.2-201ENST00000543613 532 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 RN7SL853P-201ENST00000617250 223 ntBASIC3.09□□□□□ -1.91
SLC6A4P31645 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SLC6A4P31645 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.09□□□□□ -1.92
SLC6A4P31645 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A4P31645 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
SLC6A4P31645 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A4P31645 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC6A4P31645 RNU6-238P-201ENST00000363313 106 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 RNU5F-3P-201ENST00000363767 117 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 SNORD115-8-201ENST00000363856 82 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 SNORD115-38-201ENST00000365037 82 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 RNU6-611P-201ENST00000384276 104 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 RNU6-541P-201ENST00000384709 110 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 RPL21P1-201ENST00000399532 476 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 RN7SKP284-201ENST00000411002 343 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 AC138623.1-201ENST00000418060 216 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A4P31645 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A4P31645 snoU13.14-201ENST00000459372 104 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A4P31645 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 IGHV3-76-201ENST00000522465 295 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC6A4P31645 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A4P31645 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A4P31645 AC006006.1-201ENST00000603082 144 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 AL033523.1-201ENST00000605153 153 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 U6.104-201ENST00000637979 90 ntBASIC3.08□□□□□ -1.92
SLC6A4P31645 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SLC6A4P31645 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC6A4P31645 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A4P31645 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A4P31645 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A4P31645 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A4P31645 RNA5SP139-201ENST00000364340 117 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 Y_RNA.319-201ENST00000365138 92 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 RNU6-574P-201ENST00000384265 107 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 RNA5SP354-201ENST00000391247 136 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 AC012306.1-201ENST00000423267 114 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 AL358075.3-201ENST00000426289 226 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A4P31645 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.07□□□□□ -1.92
SLC6A4P31645 MTND4LP22-201ENST00000508209 276 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 RNA5SP54-201ENST00000516951 92 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A4P31645 AC006023.1-201ENST00000603944 259 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 AL450472.1-202ENST00000637286 180 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A4P31645 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SLC6A4P31645 AC000403.1-201ENST00000613696 3585 ntBASIC3.07□□□□□ -1.92
SLC6A4P31645 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms