Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNA5SP212-201ENST00000391223 107 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 MIR1287-201ENST00000408492 90 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 RNU2-23P-201ENST00000410545 195 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 AC004965.1-201ENST00000413033 213 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXA9P31269 AL121601.2-201ENST00000438019 707 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 AC243964.1-201ENST00000441814 261 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 AC009474.2-201ENST00000451383 136 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 AC117503.1-201ENST00000472241 394 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXA9P31269 RNU6-377P-201ENST00000515965 102 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 RNU6-720P-201ENST00000516363 108 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 RNU6-506P-201ENST00000516553 94 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXA9P31269 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXA9P31269 RPL30P11-203ENST00000598995 310 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 uc_338.15-201ENST00000615470 191 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 MIR8070-201ENST00000616510 88 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.65□□□□□ -2.15
HOXA9P31269 Y_RNA.3-201ENST00000362331 103 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 RNU6-527P-201ENST00000363425 104 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 RNU6-336P-201ENST00000364891 107 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 MIR95-201ENST00000385072 81 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 RNA5SP219-201ENST00000390940 113 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 RNU6-908P-201ENST00000410160 94 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 RNU6-1068P-201ENST00000410958 103 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 POLHP1-201ENST00000411806 470 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.64□□□□□ -2.15
HOXA9P31269 AL117339.3-201ENST00000418733 162 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXA9P31269 TIMM9P3-201ENST00000428659 274 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 HSPE1P21-201ENST00000438283 308 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXA9P31269 AC012308.1-201ENST00000451232 178 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 MTND3P16-201ENST00000452205 344 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AC006026.2-201ENST00000457376 180 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXA9P31269 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXA9P31269 SNORA4.4-201ENST00000515921 135 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 RNU2-53P-201ENST00000516257 147 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.64□□□□□ -2.15
HOXA9P31269 PSMA3P-201ENST00000555485 635 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 HMGB1P33-201ENST00000563485 527 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXA9P31269 EIF1P4-201ENST00000572664 335 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AC026271.5-201ENST00000577873 130 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXA9P31269 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXA9P31269 BNIP3P25-201ENST00000596023 559 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.64□□□□□ -2.15
HOXA9P31269 AC073410.2-201ENST00000603240 332 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 U2.17-201ENST00000611454 95 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.64□□□□□ -2.15
HOXA9P31269 RNU6-392P-201ENST00000364926 101 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 RNU4-66P-201ENST00000365199 138 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 RNU6-692P-201ENST00000384496 107 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 MIR544A-201ENST00000384855 91 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 MIR561-201ENST00000385216 97 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL591034.2-201ENST00000402839 359 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL033519.2-201ENST00000403958 392 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL513185.2-201ENST00000425543 193 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL591043.1-201ENST00000432461 424 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL353752.1-201ENST00000454946 260 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 snoU13.14-201ENST00000459372 104 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL121594.1-201ENST00000475906 575 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AC091435.1-201ENST00000505442 584 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 SNORA14.1-201ENST00000516113 141 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 RNU6-314P-201ENST00000516574 104 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 COPS8P3-201ENST00000526024 482 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 CENPUP1-201ENST00000526649 1202 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AC103996.1-201ENST00000555468 102 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AC093249.1-201ENST00000567049 203 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL078605.1-201ENST00000603529 500 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 RNU6-85P-201ENST00000605989 107 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AC022202.1-201ENST00000613515 211 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AC103705.1-201ENST00000619013 241 ntBASIC1.63□□□□□ -2.15
HOXA9P31269 AL391987.6-201ENST00000305671 199 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 Y_RNA.38-201ENST00000362617 102 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 RNU6-82P-201ENST00000363970 107 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 RNU6-827P-201ENST00000365553 106 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 SNORA8-201ENST00000384574 139 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 Y_RNA.554-201ENST00000384672 102 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 MIR499A-201ENST00000384903 122 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 MIR518A2-201ENST00000384966 87 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 MIR514A2-201ENST00000385131 88 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 MIR514A3-201ENST00000385132 88 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 SNORD37.1-201ENST00000390968 65 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 RPS29P13-201ENST00000402041 169 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 RNU6-293P-201ENST00000411259 106 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 RPS20P15-201ENST00000412792 311 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXA9P31269 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXA9P31269 AL161788.1-201ENST00000441805 169 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 RPL39P29-201ENST00000447779 157 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 AC018868.1-201ENST00000491307 315 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.62□□□□□ -2.15
HOXA9P31269 Y_RNA.655-201ENST00000515919 96 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 AC109479.2-201ENST00000517842 174 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms