Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.03□□□□□ -1.76
ERCC3P19447 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.03□□□□□ -1.76
ERCC3P19447 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.03□□□□□ -1.76
ERCC3P19447 FCF1P4-201ENST00000448326 183 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.03□□□□□ -1.76
ERCC3P19447 AC006445.1-201ENST00000491925 405 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 RN7SKP209-201ENST00000516888 304 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 IGKV2-26-201ENST00000518305 343 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.03□□□□□ -1.76
ERCC3P19447 MIR4425-201ENST00000580572 84 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.03□□□□□ -1.76
ERCC3P19447 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.03□□□□□ -1.76
ERCC3P19447 AC240442.1-201ENST00000616055 283 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC3P19447 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ERCC3P19447 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
ERCC3P19447 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ERCC3P19447 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ERCC3P19447 Y_RNA.143-201ENST00000363520 106 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 Y_RNA.214-201ENST00000364201 112 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.02□□□□□ -1.77
ERCC3P19447 RNU6-318P-201ENST00000384283 103 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 SNORA46.1-201ENST00000391069 153 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 AC017079.2-201ENST00000416102 485 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.02□□□□□ -1.77
ERCC3P19447 AC002075.2-201ENST00000425207 252 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 AC112220.1-201ENST00000434628 355 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.02□□□□□ -1.77
ERCC3P19447 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.02□□□□□ -1.77
ERCC3P19447 CKS1BP2-201ENST00000497342 240 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 RN7SKP282-201ENST00000516824 299 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.02□□□□□ -1.77
ERCC3P19447 EIF4A1P12-201ENST00000551910 141 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 U4.1-201ENST00000620349 87 ntBASIC4.02□□□□□ -1.77
ERCC3P19447 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.02□□□□□ -1.77
ERCC3P19447 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC3P19447 RNU6-727P-201ENST00000363592 107 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 Y_RNA.179-201ENST00000363844 90 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 SNORD115-8-201ENST00000363856 82 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 Y_RNA.222-201ENST00000364264 102 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 SNORD115-38-201ENST00000365037 82 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 RNU6-806P-201ENST00000365147 105 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 MIR634-201ENST00000385208 97 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 RPL21P1-201ENST00000399532 476 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 Y_RNA.595-201ENST00000410403 105 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 RNU2-20P-201ENST00000410425 191 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 RPS12P18-201ENST00000442381 270 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 AC006539.3-201ENST00000454258 129 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 AC067942.3-201ENST00000512025 362 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 RNU6-1143P-201ENST00000516125 104 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 Y_RNA.713-201ENST00000517013 96 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC3P19447 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC3P19447 AC078899.3-201ENST00000599065 212 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 AL021368.2-201ENST00000606125 5352 ntBASIC4.01□□□□□ -1.77
ERCC3P19447 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4□□□□□ -1.77
ERCC3P19447 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4□□□□□ -1.77
ERCC3P19447 AL512633.1-201ENST00000399931 655 ntBASIC4□□□□□ -1.77
ERCC3P19447 RNU6-130P-201ENST00000411112 103 ntBASIC4□□□□□ -1.77
ERCC3P19447 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4□□□□□ -1.77
ERCC3P19447 RPL30P4-201ENST00000429309 333 ntBASIC4□□□□□ -1.77
ERCC3P19447 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4□□□□□ -1.77
ERCC3P19447 AC005520.5-201ENST00000613926 164 ntBASIC4□□□□□ -1.77
ERCC3P19447 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4□□□□□ -1.77
ERCC3P19447 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ERCC3P19447 CEP170P1-201ENST00000502249 4587 ntBASIC4□□□□□ -1.77
ERCC3P19447 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC3P19447 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ERCC3P19447 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERCC3P19447 Y_RNA.111-201ENST00000363248 100 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 Y_RNA.183-201ENST00000363882 113 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 RNU6-702P-201ENST00000364982 107 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 RNA5SP201-201ENST00000410316 124 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 RNU6-1328P-201ENST00000410938 106 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 AL731563.1-201ENST00000442202 214 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 PCNPP5-201ENST00000452246 481 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.99□□□□□ -1.77
ERCC3P19447 RNU6-1012P-201ENST00000516606 109 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 RN7SKP49-201ENST00000516675 260 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 RNU6-579P-201ENST00000516879 102 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 SCARNA3-201ENST00000517097 143 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 MIR5006-201ENST00000583027 110 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ERCC3P19447 BX322639.1-202ENST00000423987 2213 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 FAM35CP-201ENST00000554755 2470 ntBASIC3.99□□□□□ -1.77
ERCC3P19447 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERCC3P19447 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ERCC3P19447 Y_RNA.26-201ENST00000362539 101 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 SNORA18.2-201ENST00000383865 132 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 Y_RNA.452-201ENST00000384202 108 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 RNU6-505P-201ENST00000384427 107 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 AL079342.1-201ENST00000401460 267 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 AL033519.2-201ENST00000403958 392 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 Y_RNA.597-201ENST00000410463 100 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 SNORA59A-201ENST00000459326 152 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 AC007215.1-201ENST00000464893 276 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 RNU6-570P-201ENST00000517051 105 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 MIR376A1-201ENST00000616574 68 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 MIR7157-201ENST00000635801 60 ntBASIC3.98□□□□□ -1.77
ERCC3P19447 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms