Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 MRPS10P2-201ENST00000431226 381 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL645568.3-201ENST00000433683 316 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 ERLEC1P1-201ENST00000433806 578 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 FGF7P6-202ENST00000451282 293 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC055731.1-201ENST00000474387 401 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC083904.1-201ENST00000487828 231 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU2-19P-201ENST00000517288 84 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC109329.1-201ENST00000518744 317 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 MTND1P35-201ENST00000526739 508 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR3941-201ENST00000582572 103 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL713866.2-201ENST00000603579 219 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC092747.3-201ENST00000603769 301 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-85P-201ENST00000605989 107 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL121757.2-201ENST00000611223 313 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC007014.2-201ENST00000615581 479 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC097372.5-201ENST00000623665 376 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR7157-201ENST00000635801 60 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORD56.1-201ENST00000362913 68 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-486P-201ENST00000363116 107 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-1285P-201ENST00000363480 105 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU5E-7P-201ENST00000365290 117 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-692P-201ENST00000384496 107 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-332P-201ENST00000391193 108 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 Y_RNA.619-201ENST00000410951 90 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNRPEP10-201ENST00000420249 274 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 IFNA20P-201ENST00000436840 528 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC124916.1-201ENST00000444020 547 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 snoU13.14-201ENST00000459372 104 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC069439.1-201ENST00000494739 167 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTCYBP18-201ENST00000501056 747 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-718P-201ENST00000516166 105 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 HSBP1P1-201ENST00000555205 166 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR5571-201ENST00000577998 113 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC064836.2-201ENST00000609491 462 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC122108.2-201ENST00000611946 526 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTND5P30-201ENST00000452896 1731 ntBASIC1.65□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-254P-201ENST00000363377 107 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNORD32A-201ENST00000364805 84 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNA5SP125-201ENST00000364843 120 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU6-827P-201ENST00000365553 106 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR186-201ENST00000384988 86 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 MIR95-201ENST00000385072 81 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU2-23P-201ENST00000410545 195 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 FCF1P9-201ENST00000412546 282 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 EIF1P1-201ENST00000421436 341 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPS3AP44-201ENST00000425466 790 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNAP23P1-201ENST00000433229 246 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 FAM206BP-201ENST00000510179 541 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNA5SP112-201ENST00000515937 99 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC103996.1-201ENST00000555468 102 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC105245.1-201ENST00000581934 244 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 VN1R107P-201ENST00000601784 209 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AL359821.1-201ENST00000605519 182 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC084782.3-201ENST00000612282 578 ntBASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.64□□□□□ -2.15
TMX2-CTNND1H3BSU7 MTND5P10-201ENST00000603719 1809 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU1-57P-201ENST00000384491 166 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 SNORD37.1-201ENST00000390968 65 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU4-62P-201ENST00000410125 130 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 CYCSP48-201ENST00000417124 323 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 RNU7-138P-201ENST00000459479 64 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC092989.1-201ENST00000481235 277 ntBASIC1.63□□□□□ -2.15
TMX2-CTNND1H3BSU7 AC092436.3-201ENST00000511788 257 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms