Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC034244.1-201ENST00000507687 207 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC108729.3-201ENST00000513484 108 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 Y_RNA.672-201ENST00000516289 104 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC023050.3-201ENST00000541142 333 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 CYP3A52P-201ENST00000563326 91 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 BNIP3P16-201ENST00000589779 534 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC112191.3-201ENST00000604371 277 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 AC091304.9-201ENST00000612091 226 ntBASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
HHLA3Q9XRX5 U3.4-201ENST00000363352 213 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 Y_RNA.255-201ENST00000364581 97 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 RNU5E-5P-201ENST00000365379 116 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 SNORA20.2-201ENST00000383922 131 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 RNU6-378P-201ENST00000384324 107 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 MIR194-1-201ENST00000384892 85 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 RNU2-7P-201ENST00000410794 178 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC106883.1-201ENST00000418805 562 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 EIF1P1-201ENST00000421436 341 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 FTH1P12-201ENST00000432137 551 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC104850.1-201ENST00000435940 476 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 GTF2IP13-201ENST00000438487 386 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC013470.1-201ENST00000453438 462 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC016925.1-201ENST00000458303 298 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 RNU7-14P-201ENST00000459331 62 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC007547.1-201ENST00000462177 490 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC104136.1-201ENST00000512969 394 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC022878.1-201ENST00000530684 149 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC021231.3-201ENST00000558497 370 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 MTND1P8-201ENST00000571424 950 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC008751.2-201ENST00000597885 980 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC078795.3-201ENST00000602913 472 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC107304.1-201ENST00000604229 296 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 MIR3976-201ENST00000606807 139 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AL391834.2-201ENST00000609982 546 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 PCGEM1.1-201ENST00000613431 131 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 AC011155.2-201ENST00000623202 216 ntBASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HHLA3Q9XRX5 SNORD33-201ENST00000362761 85 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 RNU6-1019P-201ENST00000364424 107 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 SNORD31B-201ENST00000364977 69 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 RNU6-715P-201ENST00000365204 103 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 SNORA26.3-201ENST00000391119 136 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AL117342.1-201ENST00000404861 406 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 RN7SKP61-201ENST00000410642 295 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 HIGD1AP15-201ENST00000416198 280 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 EBAG9P1-201ENST00000418955 543 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AC078809.1-201ENST00000427601 140 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 USP9YP12-201ENST00000450481 570 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AC079140.3-201ENST00000511111 550 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 SNORD60.2-201ENST00000516883 86 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 RNU2-46P-201ENST00000517038 113 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AC090572.1-201ENST00000519251 160 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 RAB11AP2-201ENST00000545905 639 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 HSPE1P4-201ENST00000550617 308 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 MIR3923-201ENST00000579521 83 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 CTHRC1P1-201ENST00000605383 469 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AC138649.3-201ENST00000622154 254 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AC009033.1-201ENST00000624279 431 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 AL450472.1-202ENST00000637286 180 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 MTND5P35-201ENST00000557537 1720 ntBASIC0.75□□□□□ -2.29
HHLA3Q9XRX5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 U3.9-201ENST00000363823 204 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 RNY1P12-201ENST00000364251 105 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 RNU6-331P-201ENST00000384724 107 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 RPL23AP36-201ENST00000413895 458 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 ARL5AP1-201ENST00000418991 388 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 AL354692.1-201ENST00000423044 315 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 SNAP23P1-201ENST00000433229 246 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 TAF9P1-201ENST00000445421 515 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 MTCYBP1-201ENST00000454315 1119 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 TAF9P2-201ENST00000454958 515 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 AC091874.1-201ENST00000511402 339 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 TRMT112P2-201ENST00000512910 132 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 RNU5F-4P-201ENST00000516581 114 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 RNU6-1178P-201ENST00000516674 107 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms