Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 RNU5B-2P-201ENST00000363036 113 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 RNU6-151P-201ENST00000364158 107 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.215-201ENST00000364204 112 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 SNORD32A-201ENST00000364805 84 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.357-201ENST00000365487 109 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.400-201ENST00000383963 111 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 SEPT7P4-201ENST00000437076 306 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 AP000873.1-201ENST00000463987 400 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 SNORA31.8-201ENST00000516327 108 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 MIR8058-201ENST00000615737 89 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 AC048347.1-201ENST00000624621 427 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 AL049781.1-201ENST00000623195 3585 ntBASIC4.43□□□□□ -1.7
EFCC1Q9HA90 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 CUL1P1-201ENST00000509510 2425 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 RNU6-942P-201ENST00000363002 107 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 RNU1-18P-201ENST00000363062 164 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 RNU6-653P-201ENST00000363074 106 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 RNU6-873P-201ENST00000363833 107 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.182-201ENST00000363880 111 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 RNU6-1168P-201ENST00000390831 104 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 RN7SL807P-201ENST00000470923 297 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 AC010999.1-201ENST00000611856 324 ntBASIC4.42□□□□□ -1.7
EFCC1Q9HA90 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EFCC1Q9HA90 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 AL353746.1-201ENST00000566293 6881 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 FTLP6-201ENST00000355274 422 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 RNA5SP189-201ENST00000364920 115 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 SNORD20-201ENST00000384550 80 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 MIR607-201ENST00000385241 96 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.580-201ENST00000391004 95 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 MIR1251-201ENST00000408552 70 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 ATP5A1P2-201ENST00000412323 255 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 RNU6-625P-201ENST00000459412 107 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 RN7SL271P-201ENST00000487601 295 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 AC005921.1-201ENST00000510589 286 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 RNU6-191P-201ENST00000516295 94 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 AC019159.1-201ENST00000605094 187 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 U6.98-201ENST00000637157 84 ntBASIC4.41□□□□□ -1.7
EFCC1Q9HA90 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.41□□□□□ -1.7
EFCC1Q9HA90 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
EFCC1Q9HA90 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.4□□□□□ -1.7
EFCC1Q9HA90 AC008568.2-201ENST00000623862 2313 ntBASIC4.4□□□□□ -1.7
EFCC1Q9HA90 OTUD4P1-201ENST00000237841 3067 ntBASIC4.4□□□□□ -1.7
EFCC1Q9HA90 AL109809.4-201ENST00000603520 2185 ntBASIC4.4□□□□□ -1.7
EFCC1Q9HA90 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.4□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.101-201ENST00000363154 102 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 Y_RNA.238-201ENST00000364441 102 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 RNA5SP167-201ENST00000365461 116 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 Y_RNA.498-201ENST00000384460 102 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 U3.19-201ENST00000390893 196 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 U3.26-201ENST00000391236 204 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 RNA5SP120-201ENST00000410900 112 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 UBE2DNL-203ENST00000474922 222 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 RNU6-155P-201ENST00000516347 100 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 AC022441.3-201ENST00000605737 136 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 AC004467.1-201ENST00000615678 330 ntBASIC4.4□□□□□ -1.71
EFCC1Q9HA90 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.4□□□□□ -1.71
EFCC1Q9HA90 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
EFCC1Q9HA90 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EFCC1Q9HA90 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
EFCC1Q9HA90 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
EFCC1Q9HA90 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.39□□□□□ -1.71
EFCC1Q9HA90 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
EFCC1Q9HA90 Y_RNA.7-201ENST00000362352 102 ntBASIC4.39□□□□□ -1.71
EFCC1Q9HA90 SNORA38.1-201ENST00000364172 131 ntBASIC4.39□□□□□ -1.71
EFCC1Q9HA90 Y_RNA.412-201ENST00000384001 104 ntBASIC4.39□□□□□ -1.71
EFCC1Q9HA90 MIR518D-201ENST00000385014 87 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms