Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL359314.1-201ENST00000616913 261 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AL132822.1-201ENST00000617063 513 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AL359757.2-201ENST00000624309 274 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 Z69720.2-201ENST00000624755 279 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 U4.7-201ENST00000638126 106 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 Y_RNA.372-201ENST00000365599 102 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 MIR181A1-201ENST00000385026 110 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 RNU6-648P-201ENST00000410190 107 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 MTND1P34-201ENST00000438556 671 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 AC007969.2-201ENST00000441891 191 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 RNU7-167P-201ENST00000459160 62 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 RNU6-314P-201ENST00000516574 104 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 AC016957.1-201ENST00000534895 309 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 MIR3124-201ENST00000582636 67 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 AC012557.2-201ENST00000605919 418 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 AC004492.1-201ENST00000607036 742 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 Z82243.1-201ENST00000609432 473 ntBASIC1.94□□□□□ -2.1
CCSER1Q9C0I3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 RNU6-780P-201ENST00000391030 104 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 RNU2-48P-201ENST00000410694 191 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 AL358453.1-201ENST00000422522 250 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 RPS15AP10-201ENST00000432472 382 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 CCDC34P1-201ENST00000507441 517 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 RNA5SP401-201ENST00000515920 127 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 RNU6-377P-201ENST00000515965 102 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 SNORA25.17-201ENST00000517184 124 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 U2.17-201ENST00000611454 95 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
CCSER1Q9C0I3 SNORD115-3-201ENST00000363100 82 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 RNU6-483P-201ENST00000384088 108 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 Y_RNA.516-201ENST00000384541 124 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 MIR544A-201ENST00000384855 91 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 SNORD37.1-201ENST00000390968 65 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AL590002.1-201ENST00000406554 418 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 MTCO1P21-201ENST00000416634 589 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AL353752.1-201ENST00000454946 260 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AC022447.4-201ENST00000504053 364 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 RNU6-237P-201ENST00000515985 71 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 RNU6-1281P-201ENST00000516223 105 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 Y_RNA.704-201ENST00000516851 102 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AL157687.1-201ENST00000554853 619 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 ZNF519P2-201ENST00000557032 169 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 TPRKBP2-201ENST00000565969 475 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AL162413.1-201ENST00000603198 110 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 CYP2C61P-201ENST00000604072 290 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AC002044.1-201ENST00000606707 158 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 MIR1321-201ENST00000637766 79 ntBASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCSER1Q9C0I3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 RNU6-82P-201ENST00000363970 107 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 RNU6-266P-201ENST00000364225 107 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 RNU6-38P-201ENST00000384085 107 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 RNU6-1215P-201ENST00000384441 102 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 POLHP1-201ENST00000411806 470 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 SEPT14P3-201ENST00000439401 183 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 AL732372.2-207ENST00000445840 183 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 SEPT14P2-201ENST00000453405 183 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 RNU6-333P-201ENST00000459117 107 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 MTCO3P38-201ENST00000468910 766 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 AC104564.1-201ENST00000493028 407 ntBASIC1.91□□□□□ -2.1
CCSER1Q9C0I3 AC091885.1-201ENST00000506658 268 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms