Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AL034345.1-201ENST00000407768 123 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA11B-201ENST00000408175 129 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR1290-201ENST00000408735 78 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORD63B-201ENST00000411005 70 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ALDH7A1P4-201ENST00000412255 178 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 DBIP2-201ENST00000419076 262 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 HMGN2P38-201ENST00000423806 265 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 FUNDC2P2-202ENST00000443452 493 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 COX4I1P2-201ENST00000447446 547 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC097359.1-201ENST00000447946 463 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AL121578.2-201ENST00000448797 447 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AURKAPS2-201ENST00000454983 333 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU7-67P-201ENST00000459003 62 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL372P-201ENST00000461982 298 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC112771.1-201ENST00000463581 102 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL216P-201ENST00000471607 298 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SL502P-201ENST00000481857 290 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SNRPCP11-201ENST00000492453 205 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RPS10P20-201ENST00000494130 463 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PARP4P3-201ENST00000510265 317 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 HIGD1AP3-201ENST00000515857 278 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SKP276-201ENST00000516242 268 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP67-201ENST00000516422 131 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP441-201ENST00000516809 88 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-341P-201ENST00000516973 96 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR3124-201ENST00000582636 67 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RPL29P33-201ENST00000587474 316 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MRPS5P4-201ENST00000592830 325 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC097381.3-201ENST00000608962 462 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 uc_338.29-201ENST00000615099 168 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR6071-201ENST00000616741 78 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR6729-201ENST00000618194 65 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC211486.4-201ENST00000621495 113 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC087894.3-201ENST00000623682 349 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC061999.1-201ENST00000624454 177 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR665-201ENST00000635949 72 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 Z83843.1-201ENST00000604070 3685 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC1.23□□□□□ -2.21
KRTAP4-4Q9BYR3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms