Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AP002088.1-201ENST00000382740 395 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.504-201ENST00000384481 104 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.539-201ENST00000384635 107 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 MIR153-2-201ENST00000385225 87 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 UBA52P6-201ENST00000399822 382 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 MRPL35P1-201ENST00000404272 572 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 AC126124.2-201ENST00000413542 321 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 AL590135.1-201ENST00000422215 156 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 EIF1P2-201ENST00000428233 350 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 AC107626.1-201ENST00000471084 183 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 RPS29P2-201ENST00000479278 136 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 AC016632.1-201ENST00000503994 196 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 SNORA70.14-201ENST00000516205 110 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 RNU6-1338P-201ENST00000516328 91 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 AL356274.2-201ENST00000624379 3752 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AC017071.1-201ENST00000564407 2204 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 MIR30E-201ENST00000362104 92 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RNU5B-2P-201ENST00000363036 113 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 SNORD81.1-201ENST00000363064 77 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RNU6-338P-201ENST00000383888 105 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RNU6-926P-201ENST00000384075 107 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RNU6-937P-201ENST00000384325 106 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.541-201ENST00000384640 113 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RNU6-748P-201ENST00000384648 107 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 MIR634-201ENST00000385208 97 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RNA5SP213-201ENST00000391031 106 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RNU1-139P-201ENST00000391307 165 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RPS15AP7-201ENST00000439294 405 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 GPM6BP3-201ENST00000442797 145 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AL441985.1-201ENST00000457727 251 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 RPS4XP2-201ENST00000458402 793 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 SNORA31.6-201ENST00000516241 130 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AC090897.2-201ENST00000581715 130 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AC091152.3-201ENST00000604227 325 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AL450472.1-202ENST00000637286 180 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 AC007256.1-201ENST00000392253 2765 ntBASIC3.18□□□□□ -1.9
NDC1Q9BTX1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
NDC1Q9BTX1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 RNU6-622P-201ENST00000384272 103 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 MIR128-1-201ENST00000384921 82 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.581-201ENST00000391017 97 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AL603910.2-201ENST00000407268 136 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.602-201ENST00000410535 92 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 RN7SKP61-201ENST00000410642 295 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AC096649.2-201ENST00000416186 393 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AC078809.1-201ENST00000427601 140 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 RPL39P29-201ENST00000447779 157 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 RNU6-138P-201ENST00000515952 107 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 SNORA31.21-201ENST00000517180 77 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AC073657.2-201ENST00000605661 303 ntBASIC3.17□□□□□ -1.9
NDC1Q9BTX1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NDC1Q9BTX1 AC010889.1-201ENST00000566193 2666 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NDC1Q9BTX1 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
NDC1Q9BTX1 AC092268.1-201ENST00000342691 405 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 RNA5SP361-201ENST00000362686 118 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 SNORD113-8-201ENST00000363497 74 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 RNU6-200P-201ENST00000364743 107 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.352-201ENST00000365439 102 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NDC1Q9BTX1 RNU6-209P-201ENST00000384118 107 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 U8.10-201ENST00000384260 133 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 RNU6-541P-201ENST00000384709 110 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 MIR487A-201ENST00000385009 80 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NDC1Q9BTX1 MTND5P15-201ENST00000434246 349 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 HMGN2P20-201ENST00000437531 273 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.16□□□□□ -1.9
NDC1Q9BTX1 AC115115.1-201ENST00000449927 248 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 AL139109.1-201ENST00000455491 297 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 RPL30P12-201ENST00000474666 353 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 RNU5B-3P-201ENST00000516601 115 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms