Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR518D-201ENST00000385014 87 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 MIR329-1-201ENST00000385028 80 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-918P-201ENST00000391219 106 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.595-201ENST00000410403 105 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.597-201ENST00000410463 100 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC074117.2-201ENST00000417130 397 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC092047.1-201ENST00000424997 240 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC005326.1-201ENST00000429197 123 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 RPS4XP22-201ENST00000480755 780 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC016632.1-201ENST00000503994 196 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC097462.2-201ENST00000504623 481 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 AC073349.3-201ENST00000617616 186 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 SNORA43.4-201ENST00000629559 138 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 ZNF204P-201ENST00000416749 2397 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 RNU5B-2P-201ENST00000363036 113 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 U8.10-201ENST00000384260 133 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-1081P-201ENST00000384537 107 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 FTH1P15-201ENST00000406984 280 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 RNA5SP247-201ENST00000411181 105 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 AL451074.5-201ENST00000415894 435 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 HMGB3P8-201ENST00000449709 577 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 RPL21P10-201ENST00000463521 490 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-1219P-201ENST00000516143 112 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 RNU2-27P-201ENST00000516185 142 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 RN7SKP209-201ENST00000516888 304 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 MIR4423-201ENST00000580922 80 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 AL359198.2-201ENST00000611836 194 ntBASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SYNGAP1Q96PV0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 MIR449A-201ENST00000362113 91 ntBASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.240-201ENST00000364469 95 ntBASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-1145P-201ENST00000384246 107 ntBASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 MIR3074-201ENST00000384885 81 ntBASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 UBL5P3-201ENST00000475112 231 ntBASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 MIR4282-201ENST00000583613 67 ntBASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 AC011921.3-201ENST00000605540 361 ntBASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SYNGAP1Q96PV0 UBE2WP1-201ENST00000362030 340 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RNU4-35P-201ENST00000362588 141 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-873P-201ENST00000363833 107 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 SNORA7.2-201ENST00000364446 145 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RNU1-100P-201ENST00000365255 165 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RNY1P5-201ENST00000383890 115 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RPL26P27-201ENST00000414397 437 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 DBIP2-201ENST00000419076 262 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 HMGN2P21-201ENST00000447764 270 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 S100A11P2-201ENST00000467589 312 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RPL30P12-201ENST00000474666 353 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-581P-201ENST00000516214 105 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 AC010999.1-201ENST00000611856 324 ntBASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SYNGAP1Q96PV0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-50P-201ENST00000362356 103 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-778P-201ENST00000363269 103 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 RNU4-56P-201ENST00000364700 142 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AL358075.3-201ENST00000426289 226 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AC005300.1-201ENST00000428401 373 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AC007969.2-201ENST00000441891 191 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 UQCRBP2-201ENST00000447827 297 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 RPL30P5-201ENST00000494923 336 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 YWHAEP4-201ENST00000505390 198 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AL356157.2-201ENST00000605122 111 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AP003355.3-201ENST00000623465 114 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms