Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 Y_RNA.294-201ENST00000364916 102 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 RNU6-1180P-201ENST00000364935 107 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 SNORA73.2-201ENST00000364946 201 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 U8.11-201ENST00000384699 133 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 U8.12-201ENST00000384701 133 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 MIR325-201ENST00000385260 98 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 SNORA3C-201ENST00000408792 125 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 GPM6BP3-201ENST00000442797 145 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AL358232.1-201ENST00000448030 501 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 U8.18-201ENST00000459285 133 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 RNU6-1198P-201ENST00000516904 67 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AP004607.1-201ENST00000524456 203 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AC016256.1-201ENST00000547971 354 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AC090049.2-201ENST00000550377 109 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AC087499.8-201ENST00000578406 226 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 U7.2-201ENST00000607576 63 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AC013791.1-201ENST00000616619 62 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.49□□□□□ -1.69
TRERF1Q96PN7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.49□□□□□ -1.69
TRERF1Q96PN7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRERF1Q96PN7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRERF1Q96PN7 Y_RNA.24-201ENST00000362508 103 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 SNORA71.3-201ENST00000362582 128 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 RNU6-235P-201ENST00000362644 107 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 RNU6-1048P-201ENST00000364054 107 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 U1.1-201ENST00000384101 164 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 RNU6-768P-201ENST00000384683 107 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.48□□□□□ -1.69
TRERF1Q96PN7 AC146507.2-201ENST00000460608 476 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 RNU6-436P-201ENST00000516171 114 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 SCARNA14-201ENST00000516903 136 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.48□□□□□ -1.69
TRERF1Q96PN7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRERF1Q96PN7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRERF1Q96PN7 AL161912.2-201ENST00000565707 3007 ntBASIC4.48□□□□□ -1.69
TRERF1Q96PN7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRERF1Q96PN7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRERF1Q96PN7 RNU6-1285P-201ENST00000363480 105 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 Y_RNA.179-201ENST00000363844 90 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 Y_RNA.293-201ENST00000364908 93 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 U8.7-201ENST00000364940 136 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 MIR518D-201ENST00000385014 87 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 RNU6-1245P-201ENST00000411130 106 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AC063976.4-201ENST00000421971 163 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AL356867.1-201ENST00000429623 299 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 FTH1P6-201ENST00000430768 320 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AC083863.1-201ENST00000438811 231 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AC245047.8-201ENST00000456455 284 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AC091179.3-201ENST00000474761 144 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.47□□□□□ -1.69
TRERF1Q96PN7 RNU6-561P-201ENST00000516222 102 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 HSPE1P4-201ENST00000550617 308 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 MIR486-1-201ENST00000612171 68 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AL078604.3-201ENST00000615580 211 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 AC024581.2-201ENST00000619986 252 ntBASIC4.47□□□□□ -1.69
TRERF1Q96PN7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.47□□□□□ -1.69
TRERF1Q96PN7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.47□□□□□ -1.69
TRERF1Q96PN7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRERF1Q96PN7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
TRERF1Q96PN7 AL359693.1-201ENST00000614959 2407 ntBASIC4.46□□□□□ -1.69
TRERF1Q96PN7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
TRERF1Q96PN7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.46□□□□□ -1.69
TRERF1Q96PN7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 SNORD56.1-201ENST00000362913 68 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 SNORA8.3-201ENST00000384679 139 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 SNORA40.5-201ENST00000391061 128 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AL512633.1-201ENST00000399931 655 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 RNU6-588P-201ENST00000410281 105 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 RN7SKP53-201ENST00000411337 315 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 MTATP6P7-201ENST00000453315 681 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 Vault.1-201ENST00000516474 102 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 RNU6-1183P-201ENST00000517054 60 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 NACAP3-201ENST00000552100 481 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AC108081.1-201ENST00000604358 221 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AP002826.1-201ENST00000608835 315 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AL773545.4-201ENST00000637262 310 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 AL513478.4-201ENST00000641636 310 ntBASIC4.46□□□□□ -1.7
TRERF1Q96PN7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRERF1Q96PN7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.45□□□□□ -1.7
TRERF1Q96PN7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRERF1Q96PN7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRERF1Q96PN7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms