Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF139Q8WU17 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC010424.1-201ENST00000506336 297 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC009646.1-201ENST00000510455 318 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC005741.1-201ENST00000511094 432 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC079140.3-201ENST00000511111 550 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC104136.1-201ENST00000512969 394 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF139Q8WU17 RNA5SP503-201ENST00000517047 117 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 MTND2P38-201ENST00000522536 667 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AP002963.1-201ENST00000530590 184 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 SUB1P2-201ENST00000556401 297 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 SUB1P4-201ENST00000566062 339 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AL391840.1-201ENST00000571144 367 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 MIR4703-201ENST00000577728 79 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 RSL24D1P11-201ENST00000591045 491 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC068790.2-201ENST00000602601 557 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 AP000942.3-201ENST00000603702 160 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.57□□□□□ -2.16
RNF139Q8WU17 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF139Q8WU17 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF139Q8WU17 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RNF139Q8WU17 SNORD116-9-201ENST00000384000 95 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 SNORD116-3-201ENST00000384287 95 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 SNORD116-7-201ENST00000384404 95 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 SNORD116-5-201ENST00000384462 95 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 RNU6-606P-201ENST00000384721 111 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 CDK8P2-201ENST00000415020 547 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.56□□□□□ -2.16
RNF139Q8WU17 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.56□□□□□ -2.16
RNF139Q8WU17 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.56□□□□□ -2.16
RNF139Q8WU17 AL360221.1-201ENST00000445989 335 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AL122001.1-201ENST00000457027 370 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC022364.2-201ENST00000457963 554 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 TPT1P7-201ENST00000458300 517 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 RNU1-98P-201ENST00000458992 160 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC087477.1-201ENST00000465747 340 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.56□□□□□ -2.16
RNF139Q8WU17 RNA5SP490-201ENST00000517141 136 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC006362.1-201ENST00000567392 174 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.56□□□□□ -2.16
RNF139Q8WU17 MIR3136-201ENST00000583498 78 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AL512598.1-201ENST00000610158 273 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 AC090582.1-201ENST00000636321 199 ntBASIC1.56□□□□□ -2.16
RNF139Q8WU17 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RNF139Q8WU17 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RNF139Q8WU17 AL161722.3-201ENST00000605789 2983 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 RNU6-1303P-201ENST00000364841 107 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 Y_RNA.332-201ENST00000365271 113 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 Y_RNA.359-201ENST00000365498 102 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 RNU6-1103P-201ENST00000384150 107 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 SNORD116-1-201ENST00000384335 95 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 DEFB108C-201ENST00000400154 252 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 RNU2-9P-201ENST00000410194 145 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 MTATP6P18-201ENST00000417994 673 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF139Q8WU17 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF139Q8WU17 AC245517.4-201ENST00000448601 281 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 HMGN1P13-201ENST00000505795 138 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 AC074344.1-201ENST00000512823 224 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 RNU5F-2P-201ENST00000516066 82 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 RNU6-1178P-201ENST00000516674 107 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.55□□□□□ -2.16
RNF139Q8WU17 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF139Q8WU17 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.55□□□□□ -2.16
RNF139Q8WU17 AC008945.2-201ENST00000606056 604 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 RN7SKP299-201ENST00000606679 301 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
RNF139Q8WU17 LINC02555-201ENST00000563933 1951 ntBASIC1.55□□□□□ -2.16
RNF139Q8WU17 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF139Q8WU17 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF139Q8WU17 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF139Q8WU17 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RNF139Q8WU17 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.54□□□□□ -2.16
RNF139Q8WU17 RNU6-1120P-201ENST00000362988 108 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 RNU6-414P-201ENST00000363705 104 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 SNORD32B-201ENST00000364460 84 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RNF139Q8WU17 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 RNU6-174P-201ENST00000410406 106 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 RNU4-46P-201ENST00000410818 138 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF139Q8WU17 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF139Q8WU17 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.54□□□□□ -2.16
RNF139Q8WU17 FTH1P12-201ENST00000432137 551 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 FTH1P25-201ENST00000447665 469 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 RPL31P3-201ENST00000458430 332 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 SNORA31.17-201ENST00000516953 127 ntBASIC1.54□□□□□ -2.16
RNF139Q8WU17 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms