Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
SNED1Q8TER0 AL590632.1-201ENST00000424289 371 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.59□□□□□ -2
SNED1Q8TER0 AC096644.2-201ENST00000429278 159 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 NEFMP1-201ENST00000443423 1006 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.59□□□□□ -2
SNED1Q8TER0 RN7SKP210-201ENST00000459176 261 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 snoU13.28-201ENST00000459235 104 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 RNU2-69P-201ENST00000516061 100 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 Y_RNA.670-201ENST00000516255 105 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.59□□□□□ -2
SNED1Q8TER0 AMZ2P1-203ENST00000565833 850 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.59□□□□□ -2
SNED1Q8TER0 AC008739.2-201ENST00000597006 317 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.59□□□□□ -2
SNED1Q8TER0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 U4.1-201ENST00000620349 87 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 Z69720.2-201ENST00000624755 279 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SNED1Q8TER0 Y_RNA.176-201ENST00000363815 109 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 Y_RNA.252-201ENST00000364556 101 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 RNU6-1318P-201ENST00000365389 103 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SNED1Q8TER0 Y_RNA.594-201ENST00000410373 140 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.58□□□□□ -2
SNED1Q8TER0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.58□□□□□ -2
SNED1Q8TER0 AC117503.1-201ENST00000472241 394 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 AC026782.1-201ENST00000512952 449 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 AC104136.1-201ENST00000512969 394 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.58□□□□□ -2
SNED1Q8TER0 RNU6-470P-201ENST00000515954 104 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 RNU6-699P-201ENST00000517081 110 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 AP006587.4-201ENST00000526053 529 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SNED1Q8TER0 CYCSP27-201ENST00000527643 293 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.58□□□□□ -2
SNED1Q8TER0 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.58□□□□□ -2
SNED1Q8TER0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.58□□□□□ -2
SNED1Q8TER0 AC018462.2-201ENST00000605375 395 ntBASIC2.58□□□□□ -2
SNED1Q8TER0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.58□□□□□ -2
SNED1Q8TER0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
SNED1Q8TER0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNED1Q8TER0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.57□□□□□ -2
SNED1Q8TER0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SNED1Q8TER0 Y_RNA.2-201ENST00000362330 96 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 RNU6-490P-201ENST00000362985 107 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 RNU6-288P-201ENST00000363690 104 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 RNU6-214P-201ENST00000384130 107 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 RNY1P14-201ENST00000384426 108 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 MIR548F4-201ENST00000408515 105 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 HMGB3P2-201ENST00000411913 584 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 AL669831.1-202ENST00000428504 417 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 RNU6-677P-201ENST00000516914 101 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 RNU6-794P-201ENST00000517261 64 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 AC087854.1-201ENST00000519706 414 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
SNED1Q8TER0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.57□□□□□ -2
SNED1Q8TER0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNED1Q8TER0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNED1Q8TER0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNED1Q8TER0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SNED1Q8TER0 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 RNU6-238P-201ENST00000363313 106 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 RNU6-1035P-201ENST00000384477 107 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 SNORA75.6-201ENST00000391318 127 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AC092809.3-201ENST00000415453 231 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AC114482.1-201ENST00000418010 247 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.56□□□□□ -2
SNED1Q8TER0 RPL7P37-201ENST00000425095 738 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AC009414.1-201ENST00000427200 443 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 CBX3P6-201ENST00000430257 527 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AL591704.1-201ENST00000432574 275 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 RPL23AP50-201ENST00000434149 455 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.56□□□□□ -2
SNED1Q8TER0 AC087884.1-201ENST00000469738 328 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 RPL23AP70-201ENST00000483361 460 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AC026801.1-201ENST00000497178 464 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 RNU6-264P-201ENST00000517134 104 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.56□□□□□ -2
SNED1Q8TER0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.56□□□□□ -2
SNED1Q8TER0 AL161670.1-201ENST00000554348 137 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.56□□□□□ -2
SNED1Q8TER0 AC026241.1-201ENST00000517873 2142 ntBASIC2.56□□□□□ -2
SNED1Q8TER0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNED1Q8TER0 RNU6-702P-201ENST00000364982 107 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 Y_RNA.428-201ENST00000384078 102 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 RNU6-190P-201ENST00000384154 102 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 RNU6-14P-201ENST00000384630 106 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 RNU6-95P-201ENST00000384697 107 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 Y_RNA.618-201ENST00000410949 107 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 RPL23AP36-201ENST00000413895 458 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 AC008267.5-201ENST00000424928 265 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 AC108667.1-201ENST00000428618 249 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms