Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 AC092268.1-201ENST00000342691 405 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 RNU6-529P-201ENST00000363383 104 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 RNU6-142P-201ENST00000384019 107 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 SNORD116-29-201ENST00000384516 83 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 SNORA75.4-201ENST00000391278 119 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 RNU2-23P-201ENST00000410545 195 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 MTCYBP6-201ENST00000441810 138 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 RPS29P27-201ENST00000463711 170 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 AC097473.1-201ENST00000508142 408 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 RPS15AP11-201ENST00000594193 385 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 AC090971.5-201ENST00000621102 293 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 AL109809.4-201ENST00000603520 2185 ntBASIC3.22□□□□□ -1.89
COL23A1Q86Y22 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL23A1Q86Y22 AC093010.3-201ENST00000570269 15214 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.21□□□□□ -1.9
COL23A1Q86Y22 SNORD114-19-201ENST00000363072 75 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 RNU6-43P-201ENST00000384302 107 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 RNU6-692P-201ENST00000384496 107 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 SAR1AP2-201ENST00000392696 594 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 Y_RNA.594-201ENST00000410373 140 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.21□□□□□ -1.9
COL23A1Q86Y22 AP004217.1-201ENST00000480579 346 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 APOOP3-201ENST00000536787 586 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.21□□□□□ -1.9
COL23A1Q86Y22 AL353997.5-201ENST00000618886 171 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 AC137590.2-201ENST00000619709 240 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 SNORA50A-202ENST00000629536 136 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 RBBP8P1-201ENST00000449447 1844 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 AL359854.1-201ENST00000614203 1594 ntBASIC3.21□□□□□ -1.9
COL23A1Q86Y22 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 MIR369-201ENST00000362155 70 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 SNORD56.1-201ENST00000362913 68 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 SNORA75.6-201ENST00000391318 127 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 MTCYBP2-201ENST00000407745 171 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 AC011816.1-201ENST00000441346 546 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 HMGN2P23-201ENST00000456759 269 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 CKS1BP2-201ENST00000497342 240 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 AC016632.1-201ENST00000503994 196 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 AC079598.5-201ENST00000547460 117 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 MIR5696-201ENST00000578474 85 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 UCA1.1-201ENST00000620952 75 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 MIR7157-201ENST00000635801 60 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 AL669831.3-213ENST00000636676 183 ntBASIC3.2□□□□□ -1.9
COL23A1Q86Y22 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.2□□□□□ -1.9
COL23A1Q86Y22 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC027575.1-201ENST00000481064 460 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC234781.5-201ENST00000508429 271 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 RNA5SP112-201ENST00000515937 99 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 RNA5SP458-201ENST00000516188 119 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC020661.2-201ENST00000560114 134 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 MTCO3P13-201ENST00000577757 781 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 MIR4273-201ENST00000582824 84 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 MIR3605-201ENST00000583214 100 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 MIR3136-201ENST00000583498 78 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 7SK.7-201ENST00000603504 247 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 AC080078.3-201ENST00000605407 463 ntBASIC3.19□□□□□ -1.9
COL23A1Q86Y22 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL23A1Q86Y22 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
COL23A1Q86Y22 MTND4P27-201ENST00000450813 1354 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
COL23A1Q86Y22 Y_RNA.146-201ENST00000363549 102 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 SNORD32A-201ENST00000364805 84 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 SNORA26.3-201ENST00000391119 136 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 AL359511.1-201ENST00000402970 211 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.18□□□□□ -1.9
COL23A1Q86Y22 USP9YP30-201ENST00000430729 455 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL23A1Q86Y22 AC096638.1-201ENST00000444678 216 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.18□□□□□ -1.9
COL23A1Q86Y22 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
COL23A1Q86Y22 RPL31P41-201ENST00000477967 372 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms