Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 Y_RNA.40-201ENST00000362645 93 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 RNU6-271P-201ENST00000363858 105 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 RNU4-41P-201ENST00000364426 143 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 HMGN2P20-201ENST00000437531 273 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 RPL35AP15-201ENST00000468042 339 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 RNA5SP73-201ENST00000516744 108 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 HIGD1AP1-201ENST00000550979 275 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 AL021707.8-201ENST00000609428 183 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 RMST_8.1-201ENST00000610287 165 ntBASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTCRAQ6ISU1 AC026241.1-201ENST00000517873 2142 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC107068.1-201ENST00000563286 4218 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 RNU6-600P-201ENST00000362524 99 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 Z92545.1-201ENST00000411782 234 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC126124.2-201ENST00000413542 321 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC090515.1-201ENST00000465295 476 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC078817.1-201ENST00000492623 435 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 RNU6-781P-201ENST00000516377 101 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 CYCSP40-201ENST00000575927 294 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC012493.2-201ENST00000595083 291 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC091152.3-201ENST00000604227 325 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 uc_338.28-201ENST00000612082 187 ntBASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCRAQ6ISU1 AC007256.1-201ENST00000392253 2765 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 RNU6-1305P-201ENST00000364353 104 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 RNU6-106P-201ENST00000384405 107 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 RNA5SP129-201ENST00000410276 118 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 SNORA57.3-201ENST00000411095 141 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 RPL23AP62-201ENST00000463396 453 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 PPIAP15-201ENST00000479662 484 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 AC073308.1-201ENST00000623696 305 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 AC010733.2-201ENST00000589496 5702 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 AC069528.2-201ENST00000624849 1991 ntBASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTCRAQ6ISU1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 Y_RNA.124-201ENST00000363339 93 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 RNU6-309P-201ENST00000364573 106 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 Y_RNA.281-201ENST00000364774 94 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 U8.6-201ENST00000364939 135 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 RNA5SP22-201ENST00000365393 109 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 AL121890.1-201ENST00000435457 205 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 AL645939.1-201ENST00000453429 797 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 RPL21P10-201ENST00000463521 490 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 AC018630.3-201ENST00000542637 96 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 AC093732.2-201ENST00000607950 274 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 AL138880.2-201ENST00000616214 239 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 MTND5P18-201ENST00000445624 1801 ntBASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTCRAQ6ISU1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms