Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-41P-201ENST00000384741 107 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 MIR544A-201ENST00000384855 91 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 MT-TT-201ENST00000387460 66 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNU6-1228P-201ENST00000391014 107 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNY4P30-201ENST00000410216 95 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNA5SP146-201ENST00000410743 123 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 AC078809.1-201ENST00000427601 140 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 CYCSP4-201ENST00000429682 331 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 SNRPEP9-201ENST00000436794 238 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 RNU6-561P-201ENST00000516222 102 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 AC022695.1-201ENST00000522089 237 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 AC020895.1-201ENST00000595362 272 ntBASIC4.86□□□□□ -1.63
RC3H1Q5TC82 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RC3H1Q5TC82 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 Y_RNA.116-201ENST00000363292 103 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 RNU6-245P-201ENST00000384020 107 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 SNORD116-21-201ENST00000384507 92 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AC074117.2-201ENST00000417130 397 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AL714022.1-201ENST00000439897 151 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AC007215.1-201ENST00000464893 276 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 RPL23AP70-201ENST00000483361 460 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 RPS29P24-201ENST00000486345 171 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 SNORD33.1-201ENST00000516213 88 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 AC136601.2-201ENST00000604356 474 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 MIR3651-201ENST00000630427 90 ntBASIC4.85□□□□□ -1.63
RC3H1Q5TC82 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RC3H1Q5TC82 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RC3H1Q5TC82 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AC092268.1-201ENST00000342691 405 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 SNORD73B-201ENST00000364394 72 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 RNU6-728P-201ENST00000365375 104 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AL606845.1-201ENST00000404881 255 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 MIR1290-201ENST00000408735 78 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 Z92545.1-201ENST00000411782 234 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 YPEL5P1-201ENST00000419731 367 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AC012306.1-201ENST00000423267 114 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 RPL27AP8-201ENST00000424277 446 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AC005000.2-201ENST00000605468 310 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AL359198.2-201ENST00000611836 194 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 AC012640.5-201ENST00000623897 319 ntBASIC4.84□□□□□ -1.63
RC3H1Q5TC82 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.84□□□□□ -1.63
RC3H1Q5TC82 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RC3H1Q5TC82 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.64
RC3H1Q5TC82 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 AC027290.2-201ENST00000623210 18662 ntBASIC4.83□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.111-201ENST00000363248 100 ntBASIC4.83□□□□□ -1.64
RC3H1Q5TC82 RNU6-454P-201ENST00000364292 107 ntBASIC4.83□□□□□ -1.64
RC3H1Q5TC82 RNU6-356P-201ENST00000384140 107 ntBASIC4.83□□□□□ -1.64
RC3H1Q5TC82 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 RN7SL585P-201ENST00000470538 280 ntBASIC4.83□□□□□ -1.64
RC3H1Q5TC82 RPS4XP13-201ENST00000483219 789 ntBASIC4.83□□□□□ -1.64
RC3H1Q5TC82 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 CENPCP1-201ENST00000533085 2578 ntBASIC4.83□□□□□ -1.64
RC3H1Q5TC82 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.83□□□□□ -1.64
RC3H1Q5TC82 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 RNU1-62P-201ENST00000362599 164 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.35-201ENST00000362601 101 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 RNU6-727P-201ENST00000363592 107 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.229-201ENST00000364347 113 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 MIR490-201ENST00000384865 128 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 MIR634-201ENST00000385208 97 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 AL591034.1-201ENST00000407447 340 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 RPL39P29-201ENST00000447779 157 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 Y_RNA.677-201ENST00000516401 85 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 CR383656.8-201ENST00000549046 145 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 MED28P6-201ENST00000558776 231 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 SNORA62.6-201ENST00000606322 83 ntBASIC4.82□□□□□ -1.64
RC3H1Q5TC82 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RC3H1Q5TC82 AC073073.2-201ENST00000609827 2578 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms