Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VARS2Q5ST30 RNU6-349P-201ENST00000362402 107 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 UBBP2-201ENST00000376781 231 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 RNU6-616P-201ENST00000384353 107 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 Y_RNA.545-201ENST00000384652 105 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 AL445584.1-201ENST00000431451 330 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 SNORA84-201ENST00000459229 133 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 RN7SL807P-201ENST00000470923 297 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 AC113410.1-201ENST00000505029 247 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 RNU6-1270P-201ENST00000517128 108 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VARS2Q5ST30 MIR3939-201ENST00000582614 106 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 MIR4712-201ENST00000583750 82 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.96□□□□□ -1.62
VARS2Q5ST30 AC007546.2-201ENST00000623996 360 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARS2Q5ST30 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VARS2Q5ST30 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARS2Q5ST30 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
VARS2Q5ST30 AL136164.3-201ENST00000624429 3978 ntBASIC4.96□□□□□ -1.62
VARS2Q5ST30 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARS2Q5ST30 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARS2Q5ST30 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VARS2Q5ST30 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 AC010300.1-201ENST00000600671 5134 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VARS2Q5ST30 MAPK10-349ENST00000641767 3661 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VARS2Q5ST30 RNU6-1305P-201ENST00000364353 104 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 SNORD24-201ENST00000383884 75 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 RNY1P4-201ENST00000384595 115 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 RNA5SP354-201ENST00000391247 136 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 AC063976.3-201ENST00000426849 329 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 RNU7-164P-201ENST00000459221 62 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 NIP7P2-201ENST00000485801 544 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 RNU7-123P-201ENST00000515911 60 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 RNU6-581P-201ENST00000516214 105 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 SNORA70.16-201ENST00000516390 95 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 AC034105.4-201ENST00000568304 277 ntBASIC4.95□□□□□ -1.62
VARS2Q5ST30 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VARS2Q5ST30 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VARS2Q5ST30 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VARS2Q5ST30 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VARS2Q5ST30 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VARS2Q5ST30 AL031595.2-201ENST00000624215 19071 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VARS2Q5ST30 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.94□□□□□ -1.62
VARS2Q5ST30 AC021146.4-201ENST00000309229 279 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 RN7SKP224-201ENST00000364140 325 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 RNA5SP235-201ENST00000365411 114 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 RNU6-217P-201ENST00000384164 104 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 Y_RNA.507-201ENST00000384500 99 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.94□□□□□ -1.62
VARS2Q5ST30 NDUFB4P4-201ENST00000404822 243 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 RNU6-887P-201ENST00000410660 100 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 RPL23AP46-201ENST00000438548 490 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 AC080013.2-201ENST00000460866 323 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 AC010598.1-201ENST00000510378 103 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 RNA5SP20-201ENST00000515976 84 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 Y_RNA.705-201ENST00000516862 110 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 CYCSP40-201ENST00000575927 294 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 MIR4429-201ENST00000580105 73 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 MIR5197-201ENST00000583721 112 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 MIR376A2-201ENST00000636782 80 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.94□□□□□ -1.62
VARS2Q5ST30 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.94□□□□□ -1.62
VARS2Q5ST30 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.94□□□□□ -1.62
VARS2Q5ST30 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VARS2Q5ST30 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.94□□□□□ -1.62
VARS2Q5ST30 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VARS2Q5ST30 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VARS2Q5ST30 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VARS2Q5ST30 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VARS2Q5ST30 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VARS2Q5ST30 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 RNU4-15P-201ENST00000362613 141 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 RNU6-509P-201ENST00000363519 107 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 Y_RNA.360-201ENST00000365512 102 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 MIR153-1-201ENST00000384914 90 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 MIR325-201ENST00000385260 98 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 SNORA68.2-201ENST00000391263 128 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 U8.17-201ENST00000391292 132 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 AL139095.1-201ENST00000404326 391 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.93□□□□□ -1.62
VARS2Q5ST30 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VARS2Q5ST30 SCARNA10-201ENST00000459255 330 ntBASIC4.93□□□□□ -1.62
VARS2Q5ST30 AC107934.2-201ENST00000518653 310 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms