Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 SNORD115-35-201ENST00000365122 82 ntBASIC6.82□□□□□ -1.32
NCBP3Q53F19 Y_RNA.426-201ENST00000384068 113 ntBASIC6.82□□□□□ -1.32
NCBP3Q53F19 MIR802-201ENST00000390235 94 ntBASIC6.82□□□□□ -1.32
NCBP3Q53F19 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NCBP3Q53F19 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NCBP3Q53F19 HMGN2P8-201ENST00000391458 268 ntBASIC6.82□□□□□ -1.32
NCBP3Q53F19 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.82□□□□□ -1.32
NCBP3Q53F19 MIR4660-201ENST00000583549 74 ntBASIC6.82□□□□□ -1.32
NCBP3Q53F19 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.82□□□□□ -1.32
NCBP3Q53F19 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NCBP3Q53F19 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NCBP3Q53F19 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NCBP3Q53F19 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NCBP3Q53F19 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NCBP3Q53F19 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
NCBP3Q53F19 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCBP3Q53F19 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NCBP3Q53F19 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCBP3Q53F19 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCBP3Q53F19 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC6.81□□□□□ -1.32
NCBP3Q53F19 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NCBP3Q53F19 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.81□□□□□ -1.32
NCBP3Q53F19 SNORA74A-201ENST00000364089 198 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 RNU6-219P-201ENST00000364728 107 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 Y_RNA.360-201ENST00000365512 102 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 RNU6-198P-201ENST00000384258 104 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 MIR105-1-201ENST00000385222 81 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 RNU6-733P-201ENST00000410759 104 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 RPS29P10-201ENST00000439197 166 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 AC010401.1-201ENST00000463867 348 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 AC097484.1-201ENST00000471148 389 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 RNU6-1291P-201ENST00000516591 104 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC6.81□□□□□ -1.32
NCBP3Q53F19 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCBP3Q53F19 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NCBP3Q53F19 AC104623.2-202ENST00000623477 4002 ntBASIC6.81□□□□□ -1.32
NCBP3Q53F19 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 ZNF271P-202ENST00000465539 1970 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC6.8□□□□□ -1.32
NCBP3Q53F19 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
NCBP3Q53F19 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 MIR126-201ENST00000362291 85 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 RNU6-60P-201ENST00000364792 103 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 MIR1253-201ENST00000408273 105 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 HMGN2P7-201ENST00000456186 273 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 RNU2-34P-201ENST00000516534 121 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 RNU6-1018P-201ENST00000516577 106 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 SUMO2P15-201ENST00000604285 278 ntBASIC6.8□□□□□ -1.32
NCBP3Q53F19 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.8□□□□□ -1.32
NCBP3Q53F19 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCBP3Q53F19 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NCBP3Q53F19 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC6.79□□□□□ -1.32
NCBP3Q53F19 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
NCBP3Q53F19 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
NCBP3Q53F19 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NCBP3Q53F19 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NCBP3Q53F19 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
NCBP3Q53F19 SNORA18-201ENST00000384416 132 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 RN7SKP202-201ENST00000410439 330 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 COX6CP13-201ENST00000428703 226 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 RNU2-11P-201ENST00000459191 187 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 RN7SL172P-201ENST00000460535 303 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 ABCC13-202ENST00000463099 3842 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 MIR3618-201ENST00000580330 88 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 MIR3683-201ENST00000580847 82 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 AC012531.5-201ENST00000611375 151 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 AL359075.3-201ENST00000613288 217 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 AC002076.2-201ENST00000617362 122 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 AC087741.2-201ENST00000619415 172 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 MIR1255B1-201ENST00000636325 63 ntBASIC6.79□□□□□ -1.32
NCBP3Q53F19 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.79□□□□□ -1.32
NCBP3Q53F19 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NCBP3Q53F19 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NCBP3Q53F19 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NCBP3Q53F19 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NCBP3Q53F19 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NCBP3Q53F19 AL672167.1-204ENST00000641875 3017 ntBASIC6.78□□□□□ -1.32
NCBP3Q53F19 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.78□□□□□ -1.32
NCBP3Q53F19 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.78□□□□□ -1.32
NCBP3Q53F19 AC010099.1-201ENST00000455434 375 ntBASIC6.78□□□□□ -1.32
NCBP3Q53F19 RN7SL222P-201ENST00000476452 299 ntBASIC6.78□□□□□ -1.32
NCBP3Q53F19 PPIAP15-201ENST00000479662 484 ntBASIC6.78□□□□□ -1.32
NCBP3Q53F19 AC093270.2-201ENST00000486157 792 ntBASIC6.78□□□□□ -1.32
NCBP3Q53F19 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC6.78□□□□□ -1.32
NCBP3Q53F19 Y_RNA.714-201ENST00000517065 90 ntBASIC6.78□□□□□ -1.32
NCBP3Q53F19 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
NCBP3Q53F19 AC087685.1-201ENST00000587507 141 ntBASIC6.78□□□□□ -1.32
NCBP3Q53F19 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NCBP3Q53F19 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.78□□□□□ -1.32
NCBP3Q53F19 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NCBP3Q53F19 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
NCBP3Q53F19 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
NCBP3Q53F19 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NCBP3Q53F19 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NCBP3Q53F19 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms