Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-325P-201ENST00000411132 105 ntBASIC2□□□□□ -2.09
SCN1BQ07699 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2□□□□□ -2.09
SCN1BQ07699 MTCO2P7-201ENST00000446518 666 ntBASIC2□□□□□ -2.09
SCN1BQ07699 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
SCN1BQ07699 RPL23AP42-201ENST00000471152 471 ntBASIC2□□□□□ -2.09
SCN1BQ07699 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2□□□□□ -2.09
SCN1BQ07699 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2□□□□□ -2.09
SCN1BQ07699 SCOCP1-201ENST00000554676 349 ntBASIC2□□□□□ -2.09
SCN1BQ07699 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2□□□□□ -2.09
SCN1BQ07699 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2□□□□□ -2.09
SCN1BQ07699 AL160394.1-201ENST00000624765 724 ntBASIC2□□□□□ -2.09
SCN1BQ07699 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2□□□□□ -2.09
SCN1BQ07699 RNA5SP493-201ENST00000364115 91 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 SNORD114-6-201ENST00000364393 72 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 Y_RNA.332-201ENST00000365271 113 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 MIR450B-201ENST00000401182 78 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 RNU4-26P-201ENST00000410270 107 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 EIF1AXP1-201ENST00000419267 435 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 SNRPEP8-201ENST00000442866 260 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 Y_RNA.665-201ENST00000516177 98 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 RNU5F-4P-201ENST00000516581 114 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 RNU6-1098P-201ENST00000516772 96 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN1BQ07699 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN1BQ07699 AC090517.1-201ENST00000569307 266 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.99□□□□□ -2.09
SCN1BQ07699 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.99□□□□□ -2.09
SCN1BQ07699 AC087241.4-201ENST00000612441 480 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 AL136221.1-201ENST00000621449 509 ntBASIC1.99□□□□□ -2.09
SCN1BQ07699 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN1BQ07699 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SCN1BQ07699 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN1BQ07699 LINC02555-201ENST00000563933 1951 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC245060.5-201ENST00000610778 3293 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 Y_RNA.38-201ENST00000362617 102 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 Y_RNA.123-201ENST00000363338 102 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 RNU6-1090P-201ENST00000364065 94 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 SNORA32.2-201ENST00000384049 122 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 MIR518C-201ENST00000384822 101 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SCN1BQ07699 RNU6-1093P-201ENST00000391194 107 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 Y_RNA.615-201ENST00000410769 117 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.98□□□□□ -2.09
SCN1BQ07699 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN1BQ07699 UBE2V1P4-201ENST00000425374 344 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 RPS15AP28-201ENST00000435088 386 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN1BQ07699 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN1BQ07699 AC007547.1-201ENST00000462177 490 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 MRPS17P9-201ENST00000511924 393 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN1BQ07699 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC009994.1-201ENST00000606889 253 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC064807.4-201ENST00000607201 407 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC093783.1-201ENST00000612976 329 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC005520.5-201ENST00000613926 164 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN1BQ07699 MIR1291-201ENST00000627649 87 ntBASIC1.98□□□□□ -2.09
SCN1BQ07699 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN1BQ07699 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN1BQ07699 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
SCN1BQ07699 RNU6-451P-201ENST00000362921 107 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 RNY3P3-201ENST00000363816 102 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 Y_RNA.373-201ENST00000365600 103 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 MIR521-1-201ENST00000384902 87 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SCN1BQ07699 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SCN1BQ07699 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC123900.1-201ENST00000420390 96 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AL589823.1-201ENST00000429577 183 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN1BQ07699 AL035666.1-201ENST00000446195 348 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN1BQ07699 RNU7-14P-201ENST00000459331 62 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 TOMM22P6-201ENST00000465035 409 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC114801.2-201ENST00000503825 781 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC010486.1-201ENST00000511793 424 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 RNA5SP24-201ENST00000516478 95 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN1BQ07699 MIR3169-201ENST00000578032 83 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 CTHRC1P1-201ENST00000605383 469 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC012557.2-201ENST00000605919 418 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC046143.2-201ENST00000609789 160 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 U1.36-201ENST00000620684 176 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN1BQ07699 MIR1321-201ENST00000637766 79 ntBASIC1.97□□□□□ -2.09
SCN1BQ07699 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
SCN1BQ07699 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SCN1BQ07699 RNU6-1252P-201ENST00000363054 104 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 Y_RNA.318-201ENST00000365131 97 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 SNORA29-201ENST00000384183 140 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 RNU6-933P-201ENST00000384424 107 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms