Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 uc_338.15-201ENST00000615470 191 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AL354950.2-201ENST00000617939 290 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC097372.5-201ENST00000623665 376 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 HAUS6P2-201ENST00000433254 2404 ntBASIC1.21□□□□□ -2.22
TNFRSF9Q07011 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.2□□□□□ -2.22
TNFRSF9Q07011 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.2□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.1-201ENST00000352915 104 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 RNU5E-7P-201ENST00000365290 117 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.409-201ENST00000383990 98 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 RNU6-434P-201ENST00000384376 107 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 RNU2-66P-201ENST00000410650 161 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 BTF3L4P1-201ENST00000413813 468 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AL606489.2-201ENST00000433886 234 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 PRPS1P1-201ENST00000445305 876 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 GMFBP1-201ENST00000467831 427 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AC018868.1-201ENST00000491307 315 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 LRRC34P2-201ENST00000514850 553 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 RNU2-53P-201ENST00000516257 147 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AP003392.2-201ENST00000527269 208 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 DNAJC19P9-201ENST00000555084 351 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 PSMA3P-201ENST00000555485 635 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AGGF1P4-201ENST00000568249 801 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 SNORD53B-201ENST00000577887 78 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AC073410.2-201ENST00000603240 332 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AC123912.5-201ENST00000605470 343 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AL512598.1-201ENST00000610158 273 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 Z69720.2-201ENST00000624755 279 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 AC005609.4-201ENST00000625071 447 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 U4.7-201ENST00000638126 106 ntBASIC1.2□□□□□ -2.22
TNFRSF9Q07011 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TNFRSF9Q07011 MTND5P26-201ENST00000426018 1752 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 RNU6-487P-201ENST00000365430 104 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 RNU6-996P-201ENST00000365438 107 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 MIR517C-201ENST00000385103 95 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AL591034.2-201ENST00000402839 359 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 MIR1283-2-201ENST00000408621 87 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 RNA5SP390-201ENST00000410191 113 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 VN1R108P-201ENST00000431580 830 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AL365400.1-201ENST00000431854 640 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC007969.2-201ENST00000441891 191 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 MTATP6P26-201ENST00000445926 662 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC073415.1-201ENST00000449240 153 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 MTCO2P18-201ENST00000457151 658 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC006026.2-201ENST00000457376 180 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 SNRPFP3-201ENST00000457792 225 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AL163973.1-201ENST00000484753 577 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AL163540.1-201ENST00000485382 386 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 HMGB1P29-201ENST00000505659 499 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 RNU6-405P-201ENST00000516637 110 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 SNORA25.17-201ENST00000517184 124 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC109329.1-201ENST00000518744 317 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 RRN3P3-201ENST00000549207 578 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 HIF1AP1-201ENST00000553642 175 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC093249.1-201ENST00000567049 203 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 NBR2-204ENST00000587322 63 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC087683.1-201ENST00000591187 441 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC091805.2-201ENST00000603848 235 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AL645939.4-201ENST00000604495 135 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC002044.1-201ENST00000606707 158 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC245008.1-201ENST00000608123 476 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AP001596.2-201ENST00000608410 312 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC103591.3-201ENST00000608684 209 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 AC022418.1-201ENST00000624118 445 ntBASIC1.19□□□□□ -2.22
TNFRSF9Q07011 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TNFRSF9Q07011 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU6-428P-201ENST00000362942 107 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU1-23P-201ENST00000363361 144 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU6-527P-201ENST00000363425 104 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU6-259P-201ENST00000383999 107 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU6-517P-201ENST00000384362 110 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 MIR544A-201ENST00000384855 91 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU2-23P-201ENST00000410545 195 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU4-55P-201ENST00000410731 137 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL663109.1-201ENST00000411498 844 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC010975.2-201ENST00000427781 588 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL591043.1-201ENST00000432461 424 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC092473.1-201ENST00000441098 221 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms