Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL355796.1-201ENST00000406706 323 ntBASIC0.04□□□□□ -2.4
RPS28P62857 MIR1261-201ENST00000408659 82 ntBASIC0.04□□□□□ -2.4
RPS28P62857 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.04□□□□□ -2.4
RPS28P62857 Z73417.1-201ENST00000447373 778 ntBASIC0.04□□□□□ -2.4
RPS28P62857 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.04□□□□□ -2.4
RPS28P62857 AC067942.3-201ENST00000512025 362 ntBASIC0.04□□□□□ -2.4
RPS28P62857 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.04□□□□□ -2.4
RPS28P62857 RNA5SP216-201ENST00000516111 123 ntBASIC0.04□□□□□ -2.4
RPS28P62857 RN7SKP265-201ENST00000516448 223 ntBASIC0.04□□□□□ -2.4
RPS28P62857 AC016256.1-201ENST00000547971 354 ntBASIC0.04□□□□□ -2.4
RPS28P62857 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.04□□□□□ -2.4
RPS28P62857 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.04□□□□□ -2.4
RPS28P62857 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.04□□□□□ -2.4
RPS28P62857 AL356157.2-201ENST00000605122 111 ntBASIC0.04□□□□□ -2.4
RPS28P62857 AL158032.1-201ENST00000605401 106 ntBASIC0.04□□□□□ -2.4
RPS28P62857 AP002802.2-201ENST00000605877 235 ntBASIC0.04□□□□□ -2.4
RPS28P62857 AC245297.2-201ENST00000610119 565 ntBASIC0.04□□□□□ -2.4
RPS28P62857 SCARNA15.3-201ENST00000626315 122 ntBASIC0.04□□□□□ -2.4
RPS28P62857 SCARNA4.1-201ENST00000628597 123 ntBASIC0.04□□□□□ -2.4
RPS28P62857 AC100810.6-201ENST00000638068 285 ntBASIC0.04□□□□□ -2.4
RPS28P62857 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.03□□□□□ -2.4
RPS28P62857 AC092268.1-201ENST00000342691 405 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RNU1-76P-201ENST00000362903 159 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RNU6-342P-201ENST00000384521 104 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RNA5SP201-201ENST00000410316 124 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RN7SKP200-201ENST00000410564 320 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RNU6-321P-201ENST00000410912 106 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.03□□□□□ -2.4
RPS28P62857 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.03□□□□□ -2.4
RPS28P62857 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.03□□□□□ -2.4
RPS28P62857 USP9YP28-201ENST00000435142 589 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.03□□□□□ -2.4
RPS28P62857 TPRKBP1-201ENST00000456243 481 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC022364.2-201ENST00000457963 554 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RPS23P5-201ENST00000495419 428 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC108740.1-201ENST00000498629 225 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC105313.1-201ENST00000509121 353 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RNU2-34P-201ENST00000516534 121 ntBASIC0.03□□□□□ -2.4
RPS28P62857 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC109446.2-201ENST00000567872 497 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC098848.2-201ENST00000588023 330 ntBASIC0.03□□□□□ -2.4
RPS28P62857 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.03□□□□□ -2.4
RPS28P62857 AC136475.10-201ENST00000620253 385 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AL513423.1-201ENST00000621695 132 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC006927.4-201ENST00000639187 543 ntBASIC0.03□□□□□ -2.4
RPS28P62857 AC009541.1-201ENST00000438279 2662 ntBASIC0.03□□□□□ -2.4
RPS28P62857 Y_RNA.327-201ENST00000365201 102 ntBASIC0.02□□□□□ -2.41
RPS28P62857 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
RPS28P62857 Y_RNA.510-201ENST00000384511 114 ntBASIC0.02□□□□□ -2.41
RPS28P62857 RNU6-1067P-201ENST00000384752 107 ntBASIC0.02□□□□□ -2.41
RPS28P62857 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.02□□□□□ -2.41
RPS28P62857 AL355994.1-201ENST00000424379 260 ntBASIC0.02□□□□□ -2.41
RPS28P62857 AC244670.1-201ENST00000436879 112 ntBASIC0.02□□□□□ -2.41
RPS28P62857 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.02□□□□□ -2.41
RPS28P62857 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.02□□□□□ -2.41
RPS28P62857 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.02□□□□□ -2.41
RPS28P62857 RNU1-86P-201ENST00000516108 154 ntBASIC0.02□□□□□ -2.41
RPS28P62857 RNU1-107P-201ENST00000516617 154 ntBASIC0.02□□□□□ -2.41
RPS28P62857 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.02□□□□□ -2.41
RPS28P62857 TMF1P1-201ENST00000576058 373 ntBASIC0.02□□□□□ -2.41
RPS28P62857 MIR4672-201ENST00000583126 81 ntBASIC0.02□□□□□ -2.41
RPS28P62857 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.02□□□□□ -2.41
RPS28P62857 RPL17P51-201ENST00000605218 238 ntBASIC0.02□□□□□ -2.41
RPS28P62857 AL138726.1-201ENST00000614873 333 ntBASIC0.02□□□□□ -2.41
RPS28P62857 AC068787.1-201ENST00000623908 691 ntBASIC0.02□□□□□ -2.41
RPS28P62857 AL157786.1-207ENST00000627771 695 ntBASIC0.02□□□□□ -2.41
RPS28P62857 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
RPS28P62857 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
RPS28P62857 MIR378A-201ENST00000362177 66 ntBASIC0.01□□□□□ -2.41
RPS28P62857 RNU5B-4P-201ENST00000363508 111 ntBASIC0.01□□□□□ -2.41
RPS28P62857 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.01□□□□□ -2.41
RPS28P62857 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
RPS28P62857 RNY1P8-201ENST00000383970 114 ntBASIC0.01□□□□□ -2.41
RPS28P62857 RNU6-793P-201ENST00000384233 104 ntBASIC0.01□□□□□ -2.41
RPS28P62857 MIR578-201ENST00000384828 96 ntBASIC0.01□□□□□ -2.41
RPS28P62857 AC244098.3-201ENST00000424803 96 ntBASIC0.01□□□□□ -2.41
RPS28P62857 RPL17P35-201ENST00000432217 549 ntBASIC0.01□□□□□ -2.41
RPS28P62857 HMGN2P34-201ENST00000437647 269 ntBASIC0.01□□□□□ -2.41
RPS28P62857 MTND1P18-201ENST00000448191 573 ntBASIC0.01□□□□□ -2.41
RPS28P62857 HMGB1P29-201ENST00000505659 499 ntBASIC0.01□□□□□ -2.41
RPS28P62857 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.01□□□□□ -2.41
RPS28P62857 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.01□□□□□ -2.41
RPS28P62857 AC008837.2-201ENST00000513076 418 ntBASIC0.01□□□□□ -2.41
RPS28P62857 RNU6-1146P-201ENST00000516282 102 ntBASIC0.01□□□□□ -2.41
RPS28P62857 AC024995.1-201ENST00000523014 93 ntBASIC0.01□□□□□ -2.41
RPS28P62857 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.01□□□□□ -2.41
RPS28P62857 AC090517.1-201ENST00000569307 266 ntBASIC0.01□□□□□ -2.41
RPS28P62857 AC008752.3-201ENST00000588113 712 ntBASIC0.01□□□□□ -2.41
RPS28P62857 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.01□□□□□ -2.41
RPS28P62857 AC092354.1-201ENST00000606057 376 ntBASIC0.01□□□□□ -2.41
RPS28P62857 AC006927.2-201ENST00000639256 389 ntBASIC0.01□□□□□ -2.41
RPS28P62857 MTND4P5-201ENST00000435821 1374 ntBASIC0.01□□□□□ -2.41
RPS28P62857 RNU6-511P-201ENST00000363496 107 ntBASIC0□□□□□ -2.41
RPS28P62857 SNORD114-27-201ENST00000363766 70 ntBASIC0□□□□□ -2.41
RPS28P62857 RNU6-1141P-201ENST00000364520 107 ntBASIC0□□□□□ -2.41
RPS28P62857 VTRNA1-3-201ENST00000365645 89 ntBASIC0□□□□□ -2.41
RPS28P62857 RNU6-1235P-201ENST00000384559 107 ntBASIC0□□□□□ -2.41
RPS28P62857 MIR140-201ENST00000385282 100 ntBASIC0□□□□□ -2.41
RPS28P62857 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms