Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.71□□□□□ -1.82
PMS1P54277 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PMS1P54277 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS1P54277 AC010889.1-201ENST00000566193 2666 ntBASIC3.7□□□□□ -1.82
PMS1P54277 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PMS1P54277 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.7□□□□□ -1.82
PMS1P54277 RNU6-626P-201ENST00000363354 107 ntBASIC3.7□□□□□ -1.82
PMS1P54277 RNU1-64P-201ENST00000365443 163 ntBASIC3.7□□□□□ -1.82
PMS1P54277 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS1P54277 Y_RNA.595-201ENST00000410403 105 ntBASIC3.7□□□□□ -1.82
PMS1P54277 RNU2-14P-201ENST00000411053 191 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AC112220.1-201ENST00000434628 355 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS1P54277 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS1P54277 AC010095.1-201ENST00000443543 144 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AL133547.1-201ENST00000448546 220 ntBASIC3.7□□□□□ -1.82
PMS1P54277 RNU7-170P-201ENST00000459303 61 ntBASIC3.7□□□□□ -1.82
PMS1P54277 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.7□□□□□ -1.82
PMS1P54277 RN7SL442P-201ENST00000473804 320 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AC117440.1-201ENST00000474107 571 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AIG1P1-201ENST00000503376 148 ntBASIC3.7□□□□□ -1.82
PMS1P54277 SNORA40.9-201ENST00000515895 93 ntBASIC3.7□□□□□ -1.82
PMS1P54277 Y_RNA.700-201ENST00000516806 100 ntBASIC3.7□□□□□ -1.82
PMS1P54277 RNU6-182P-201ENST00000516970 105 ntBASIC3.7□□□□□ -1.82
PMS1P54277 SCARNA20.6-201ENST00000517251 106 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.7□□□□□ -1.82
PMS1P54277 CYP4A27P-201ENST00000567218 190 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AC130289.1-201ENST00000577321 73 ntBASIC3.7□□□□□ -1.82
PMS1P54277 MIR5047-201ENST00000579212 100 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS1P54277 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS1P54277 RPS15AP11-201ENST00000594193 385 ntBASIC3.7□□□□□ -1.82
PMS1P54277 RNU6-91P-201ENST00000607774 107 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AC098479.1-201ENST00000609225 154 ntBASIC3.7□□□□□ -1.82
PMS1P54277 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS1P54277 ZNF204P-201ENST00000416749 2397 ntBASIC3.7□□□□□ -1.82
PMS1P54277 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.7□□□□□ -1.82
PMS1P54277 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PMS1P54277 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS1P54277 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.69□□□□□ -1.82
PMS1P54277 AL021368.2-201ENST00000606125 5352 ntBASIC3.69□□□□□ -1.82
PMS1P54277 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.69□□□□□ -1.82
PMS1P54277 Y_RNA.269-201ENST00000364685 89 ntBASIC3.69□□□□□ -1.82
PMS1P54277 RNU6-20P-201ENST00000384106 107 ntBASIC3.69□□□□□ -1.82
PMS1P54277 RNA5SP252-201ENST00000391131 119 ntBASIC3.69□□□□□ -1.82
PMS1P54277 SNORD58.1-201ENST00000391313 66 ntBASIC3.69□□□□□ -1.82
PMS1P54277 RNU6ATAC-201ENST00000408749 126 ntBASIC3.69□□□□□ -1.82
PMS1P54277 RN7SKP111-201ENST00000410349 271 ntBASIC3.69□□□□□ -1.82
PMS1P54277 RNU6-1077P-201ENST00000410506 102 ntBASIC3.69□□□□□ -1.82
PMS1P54277 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.69□□□□□ -1.82
PMS1P54277 CYCSP48-201ENST00000417124 323 ntBASIC3.69□□□□□ -1.82
PMS1P54277 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.69□□□□□ -1.82
PMS1P54277 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.69□□□□□ -1.82
PMS1P54277 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.69□□□□□ -1.82
PMS1P54277 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.69□□□□□ -1.82
PMS1P54277 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.69□□□□□ -1.82
PMS1P54277 SNORA25.14-201ENST00000516481 132 ntBASIC3.69□□□□□ -1.82
PMS1P54277 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.69□□□□□ -1.82
PMS1P54277 AC026403.1-201ENST00000518938 295 ntBASIC3.69□□□□□ -1.82
PMS1P54277 AC104027.1-201ENST00000521887 300 ntBASIC3.69□□□□□ -1.82
PMS1P54277 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.69□□□□□ -1.82
PMS1P54277 MIR4423-201ENST00000580922 80 ntBASIC3.69□□□□□ -1.82
PMS1P54277 AL162713.1-201ENST00000604480 262 ntBASIC3.69□□□□□ -1.82
PMS1P54277 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.69□□□□□ -1.82
PMS1P54277 AC127459.3-201ENST00000624328 466 ntBASIC3.69□□□□□ -1.82
PMS1P54277 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.69□□□□□ -1.82
PMS1P54277 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.69□□□□□ -1.82
PMS1P54277 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PMS1P54277 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PMS1P54277 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.68□□□□□ -1.82
PMS1P54277 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PMS1P54277 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PMS1P54277 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.68□□□□□ -1.82
PMS1P54277 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PMS1P54277 RNU1-75P-201ENST00000347264 129 ntBASIC3.68□□□□□ -1.82
PMS1P54277 RNA5SP119-201ENST00000362715 117 ntBASIC3.68□□□□□ -1.82
PMS1P54277 RNY1-201ENST00000364228 113 ntBASIC3.68□□□□□ -1.82
PMS1P54277 Y_RNA.286-201ENST00000364813 102 ntBASIC3.68□□□□□ -1.82
PMS1P54277 Y_RNA.785-201ENST00000384290 109 ntBASIC3.68□□□□□ -1.82
PMS1P54277 MIR208B-201ENST00000401172 77 ntBASIC3.68□□□□□ -1.82
PMS1P54277 AL603908.1-201ENST00000406098 201 ntBASIC3.68□□□□□ -1.82
PMS1P54277 AC093578.1-201ENST00000415219 368 ntBASIC3.68□□□□□ -1.82
PMS1P54277 AL390729.2-201ENST00000416137 156 ntBASIC3.68□□□□□ -1.82
PMS1P54277 AC096649.2-201ENST00000416186 393 ntBASIC3.68□□□□□ -1.82
PMS1P54277 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
PMS1P54277 GZMAP1-201ENST00000503054 631 ntBASIC3.68□□□□□ -1.82
PMS1P54277 Y_RNA.683-201ENST00000516508 93 ntBASIC3.68□□□□□ -1.82
PMS1P54277 RNU2-31P-201ENST00000516954 155 ntBASIC3.68□□□□□ -1.82
PMS1P54277 RNU6-711P-201ENST00000517255 106 ntBASIC3.68□□□□□ -1.82
PMS1P54277 SNORA81.3-201ENST00000517283 198 ntBASIC3.68□□□□□ -1.82
PMS1P54277 AC022080.3-201ENST00000544433 482 ntBASIC3.68□□□□□ -1.82
PMS1P54277 MIR7851-201ENST00000610611 160 ntBASIC3.68□□□□□ -1.82
PMS1P54277 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PMS1P54277 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.68□□□□□ -1.82
PMS1P54277 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PMS1P54277 AC010680.1-201ENST00000590024 3590 ntBASIC3.68□□□□□ -1.82
PMS1P54277 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PMS1P54277 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
PMS1P54277 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
PMS1P54277 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms