Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MMP3P08254 RNU7-152P-201ENST00000458982 64 ntBASIC2.72□□□□□ -1.97
MMP3P08254 RN7SL499P-201ENST00000481141 276 ntBASIC2.72□□□□□ -1.97
MMP3P08254 AC021269.2-201ENST00000532318 330 ntBASIC2.72□□□□□ -1.97
MMP3P08254 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.72□□□□□ -1.97
MMP3P08254 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.72□□□□□ -1.97
MMP3P08254 MIR4273-201ENST00000582824 84 ntBASIC2.72□□□□□ -1.97
MMP3P08254 MIR5092-201ENST00000583139 88 ntBASIC2.72□□□□□ -1.97
MMP3P08254 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
MMP3P08254 BNIP3P16-201ENST00000589779 534 ntBASIC2.72□□□□□ -1.97
MMP3P08254 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.72□□□□□ -1.97
MMP3P08254 AP001836.1-201ENST00000604675 523 ntBASIC2.72□□□□□ -1.97
MMP3P08254 AC018889.1-201ENST00000605372 397 ntBASIC2.72□□□□□ -1.97
MMP3P08254 RPL23AP88-201ENST00000605759 454 ntBASIC2.72□□□□□ -1.97
MMP3P08254 AC046143.2-201ENST00000609789 160 ntBASIC2.72□□□□□ -1.97
MMP3P08254 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.72□□□□□ -1.97
MMP3P08254 UCA1.1-201ENST00000620952 75 ntBASIC2.72□□□□□ -1.97
MMP3P08254 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MMP3P08254 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
MMP3P08254 MAPK10-266ENST00000641066 6555 ntBASIC2.71□□□□□ -1.98
MMP3P08254 RNU6-227P-201ENST00000362865 103 ntBASIC2.71□□□□□ -1.98
MMP3P08254 Y_RNA.216-201ENST00000364205 93 ntBASIC2.71□□□□□ -1.98
MMP3P08254 SNORD56.5-201ENST00000364281 72 ntBASIC2.71□□□□□ -1.98
MMP3P08254 RNU6-843P-201ENST00000384454 104 ntBASIC2.71□□□□□ -1.98
MMP3P08254 RNU6-174P-201ENST00000410406 106 ntBASIC2.71□□□□□ -1.98
MMP3P08254 RPL19P1-201ENST00000411635 428 ntBASIC2.71□□□□□ -1.98
MMP3P08254 AC243428.1-201ENST00000421099 264 ntBASIC2.71□□□□□ -1.98
MMP3P08254 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.71□□□□□ -1.98
MMP3P08254 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.71□□□□□ -1.98
MMP3P08254 RNU6-1170P-201ENST00000515974 106 ntBASIC2.71□□□□□ -1.98
MMP3P08254 SNORA31.6-201ENST00000516241 130 ntBASIC2.71□□□□□ -1.98
MMP3P08254 SNORD19.2-201ENST00000516978 73 ntBASIC2.71□□□□□ -1.98
MMP3P08254 IGKV3-31-201ENST00000523109 329 ntBASIC2.71□□□□□ -1.98
MMP3P08254 ANP32BP3-201ENST00000559213 706 ntBASIC2.71□□□□□ -1.98
MMP3P08254 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.71□□□□□ -1.98
MMP3P08254 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.71□□□□□ -1.98
MMP3P08254 AL391813.1-201ENST00000603098 260 ntBASIC2.71□□□□□ -1.98
MMP3P08254 MIR8076-201ENST00000611401 83 ntBASIC2.71□□□□□ -1.98
MMP3P08254 AC024581.2-201ENST00000619986 252 ntBASIC2.71□□□□□ -1.98
MMP3P08254 MIR3529-201ENST00000637713 78 ntBASIC2.71□□□□□ -1.98
MMP3P08254 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.71□□□□□ -1.98
MMP3P08254 AC016717.2-201ENST00000609089 5141 ntBASIC2.71□□□□□ -1.98
MMP3P08254 AC009541.1-201ENST00000438279 2662 ntBASIC2.71□□□□□ -1.98
MMP3P08254 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
MMP3P08254 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
MMP3P08254 AC138915.1-201ENST00000565427 1685 ntBASIC2.7□□□□□ -1.98
MMP3P08254 SNORD50.1-201ENST00000362987 71 ntBASIC2.7□□□□□ -1.98
MMP3P08254 Y_RNA.187-201ENST00000363918 113 ntBASIC2.7□□□□□ -1.98
MMP3P08254 RNU6-474P-201ENST00000384243 107 ntBASIC2.7□□□□□ -1.98
MMP3P08254 SNORA75.6-201ENST00000391318 127 ntBASIC2.7□□□□□ -1.98
MMP3P08254 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
MMP3P08254 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.7□□□□□ -1.98
MMP3P08254 AC096649.2-201ENST00000416186 393 ntBASIC2.7□□□□□ -1.98
MMP3P08254 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.7□□□□□ -1.98
MMP3P08254 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.7□□□□□ -1.98
MMP3P08254 UBBP3-201ENST00000445497 241 ntBASIC2.7□□□□□ -1.98
MMP3P08254 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.7□□□□□ -1.98
MMP3P08254 AL353705.4-201ENST00000449661 238 ntBASIC2.7□□□□□ -1.98
MMP3P08254 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.7□□□□□ -1.98
MMP3P08254 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.7□□□□□ -1.98
MMP3P08254 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
MMP3P08254 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.7□□□□□ -1.98
MMP3P08254 AC022493.2-201ENST00000506122 481 ntBASIC2.7□□□□□ -1.98
MMP3P08254 SCARNA17.1-201ENST00000516211 143 ntBASIC2.7□□□□□ -1.98
MMP3P08254 SCARNA17.2-201ENST00000516334 143 ntBASIC2.7□□□□□ -1.98
MMP3P08254 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.7□□□□□ -1.98
MMP3P08254 AC078795.3-201ENST00000602913 472 ntBASIC2.7□□□□□ -1.98
MMP3P08254 AL080274.1-201ENST00000605565 220 ntBASIC2.7□□□□□ -1.98
MMP3P08254 SCARNA17.4-201ENST00000614296 143 ntBASIC2.7□□□□□ -1.98
MMP3P08254 MIR1291-201ENST00000627649 87 ntBASIC2.7□□□□□ -1.98
MMP3P08254 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
MMP3P08254 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
MMP3P08254 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
MMP3P08254 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MMP3P08254 Y_RNA.31-201ENST00000362574 102 ntBASIC2.69□□□□□ -1.98
MMP3P08254 U3.13-201ENST00000364804 214 ntBASIC2.69□□□□□ -1.98
MMP3P08254 SNORD42.2-201ENST00000365570 69 ntBASIC2.69□□□□□ -1.98
MMP3P08254 RNU6-1040P-201ENST00000383974 107 ntBASIC2.69□□□□□ -1.98
MMP3P08254 RNU6-622P-201ENST00000384272 103 ntBASIC2.69□□□□□ -1.98
MMP3P08254 RNU6-748P-201ENST00000384648 107 ntBASIC2.69□□□□□ -1.98
MMP3P08254 AP000275.1-201ENST00000411943 390 ntBASIC2.69□□□□□ -1.98
MMP3P08254 AL356320.1-201ENST00000429616 163 ntBASIC2.69□□□□□ -1.98
MMP3P08254 AC124916.1-201ENST00000444020 547 ntBASIC2.69□□□□□ -1.98
MMP3P08254 RNA5SP281-201ENST00000516504 135 ntBASIC2.69□□□□□ -1.98
MMP3P08254 MRPS36P4-201ENST00000534436 298 ntBASIC2.69□□□□□ -1.98
MMP3P08254 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.69□□□□□ -1.98
MMP3P08254 MIR4648-201ENST00000580107 72 ntBASIC2.69□□□□□ -1.98
MMP3P08254 AC090897.2-201ENST00000581715 130 ntBASIC2.69□□□□□ -1.98
MMP3P08254 MIR4719-201ENST00000585233 84 ntBASIC2.69□□□□□ -1.98
MMP3P08254 RPL23AP78-201ENST00000599928 470 ntBASIC2.69□□□□□ -1.98
MMP3P08254 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.69□□□□□ -1.98
MMP3P08254 AC005014.2-201ENST00000607795 599 ntBASIC2.69□□□□□ -1.98
MMP3P08254 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.69□□□□□ -1.98
MMP3P08254 AC133104.2-201ENST00000615272 193 ntBASIC2.69□□□□□ -1.98
MMP3P08254 AC007742.2-201ENST00000618226 398 ntBASIC2.69□□□□□ -1.98
MMP3P08254 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.69□□□□□ -1.98
MMP3P08254 MTND5P10-201ENST00000603719 1809 ntBASIC2.69□□□□□ -1.98
MMP3P08254 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.69□□□□□ -1.98
MMP3P08254 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.69□□□□□ -1.98
MMP3P08254 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms