Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MTCO3P9-201ENST00000506989 781 ntBASIC1.7□□□□□ -2.14
RETP07949 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RETP07949 SNORA40.12-201ENST00000516329 111 ntBASIC1.7□□□□□ -2.14
RETP07949 RNU6-720P-201ENST00000516363 108 ntBASIC1.7□□□□□ -2.14
RETP07949 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.7□□□□□ -2.14
RETP07949 AC022880.1-201ENST00000534017 973 ntBASIC1.7□□□□□ -2.14
RETP07949 BNIP3P6-201ENST00000549284 499 ntBASIC1.7□□□□□ -2.14
RETP07949 AC136619.2-201ENST00000563361 631 ntBASIC1.7□□□□□ -2.14
RETP07949 AL078603.1-201ENST00000603824 313 ntBASIC1.7□□□□□ -2.14
RETP07949 AC021646.1-201ENST00000605469 484 ntBASIC1.7□□□□□ -2.14
RETP07949 AP001596.2-201ENST00000608410 312 ntBASIC1.7□□□□□ -2.14
RETP07949 RMST_4.1-201ENST00000616886 107 ntBASIC1.7□□□□□ -2.14
RETP07949 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.7□□□□□ -2.14
RETP07949 AC068792.1-201ENST00000621354 417 ntBASIC1.7□□□□□ -2.14
RETP07949 RNU6-1322P-201ENST00000364309 107 ntBASIC1.69□□□□□ -2.14
RETP07949 RNU6-393P-201ENST00000384475 107 ntBASIC1.69□□□□□ -2.14
RETP07949 RNU6-1127P-201ENST00000384580 107 ntBASIC1.69□□□□□ -2.14
RETP07949 SNORD70.1-201ENST00000391007 85 ntBASIC1.69□□□□□ -2.14
RETP07949 CALM2P3-201ENST00000400429 449 ntBASIC1.69□□□□□ -2.14
RETP07949 RNU6-607P-201ENST00000411283 108 ntBASIC1.69□□□□□ -2.14
RETP07949 AC244636.1-201ENST00000421152 228 ntBASIC1.69□□□□□ -2.14
RETP07949 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.69□□□□□ -2.14
RETP07949 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.69□□□□□ -2.14
RETP07949 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.69□□□□□ -2.14
RETP07949 CYP2C59P-201ENST00000457790 269 ntBASIC1.69□□□□□ -2.14
RETP07949 AC083798.1-201ENST00000472671 131 ntBASIC1.69□□□□□ -2.14
RETP07949 AL121594.1-201ENST00000475906 575 ntBASIC1.69□□□□□ -2.14
RETP07949 AP001025.1-201ENST00000486139 332 ntBASIC1.69□□□□□ -2.14
RETP07949 AC074344.1-201ENST00000512823 224 ntBASIC1.69□□□□□ -2.14
RETP07949 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.69□□□□□ -2.14
RETP07949 RNU2-53P-201ENST00000516257 147 ntBASIC1.69□□□□□ -2.14
RETP07949 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
RETP07949 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.69□□□□□ -2.14
RETP07949 AL137161.1-201ENST00000532231 390 ntBASIC1.69□□□□□ -2.14
RETP07949 HIF1AP1-201ENST00000553642 175 ntBASIC1.69□□□□□ -2.14
RETP07949 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.69□□□□□ -2.14
RETP07949 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.69□□□□□ -2.14
RETP07949 AC093249.1-201ENST00000567049 203 ntBASIC1.69□□□□□ -2.14
RETP07949 EIF1P4-201ENST00000572664 335 ntBASIC1.69□□□□□ -2.14
RETP07949 AC090517.3-201ENST00000625170 141 ntBASIC1.69□□□□□ -2.14
RETP07949 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
RETP07949 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.69□□□□□ -2.14
RETP07949 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RETP07949 RNA5SP240-201ENST00000365355 128 ntBASIC1.68□□□□□ -2.14
RETP07949 RNU6-434P-201ENST00000384376 107 ntBASIC1.68□□□□□ -2.14
RETP07949 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RETP07949 AL033519.2-201ENST00000403958 392 ntBASIC1.68□□□□□ -2.14
RETP07949 RAP1BP3-201ENST00000407180 549 ntBASIC1.68□□□□□ -2.14
RETP07949 RNU2-3P-201ENST00000410144 191 ntBASIC1.68□□□□□ -2.14
RETP07949 CYCSP33-201ENST00000414485 327 ntBASIC1.68□□□□□ -2.14
RETP07949 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RETP07949 MTND3P21-201ENST00000433774 331 ntBASIC1.68□□□□□ -2.14
RETP07949 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.68□□□□□ -2.14
RETP07949 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.68□□□□□ -2.14
RETP07949 SCARNA18-201ENST00000459004 134 ntBASIC1.68□□□□□ -2.14
RETP07949 RNU7-180P-201ENST00000459240 63 ntBASIC1.68□□□□□ -2.14
RETP07949 RPL30P12-201ENST00000474666 353 ntBASIC1.68□□□□□ -2.14
RETP07949 HMGN1P7-201ENST00000491722 313 ntBASIC1.68□□□□□ -2.14
RETP07949 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.68□□□□□ -2.14
RETP07949 AC009646.1-201ENST00000510455 318 ntBASIC1.68□□□□□ -2.14
RETP07949 Y_RNA.670-201ENST00000516255 105 ntBASIC1.68□□□□□ -2.14
RETP07949 RNU6-506P-201ENST00000516553 94 ntBASIC1.68□□□□□ -2.14
RETP07949 RNA5SP137-201ENST00000516833 135 ntBASIC1.68□□□□□ -2.14
RETP07949 RNA5SP480-201ENST00000516840 109 ntBASIC1.68□□□□□ -2.14
RETP07949 SNORA48.11-201ENST00000517015 89 ntBASIC1.68□□□□□ -2.14
RETP07949 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.68□□□□□ -2.14
RETP07949 AC107953.1-201ENST00000522216 297 ntBASIC1.68□□□□□ -2.14
RETP07949 PSMA3P-201ENST00000555485 635 ntBASIC1.68□□□□□ -2.14
RETP07949 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.68□□□□□ -2.14
RETP07949 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
RETP07949 AC073410.2-201ENST00000603240 332 ntBASIC1.68□□□□□ -2.14
RETP07949 AC092954.2-201ENST00000609103 430 ntBASIC1.68□□□□□ -2.14
RETP07949 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.68□□□□□ -2.14
RETP07949 AC022418.1-201ENST00000624118 445 ntBASIC1.68□□□□□ -2.14
RETP07949 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RETP07949 Y_RNA.3-201ENST00000362331 103 ntBASIC1.67□□□□□ -2.14
RETP07949 SNORD56.1-201ENST00000362913 68 ntBASIC1.67□□□□□ -2.14
RETP07949 SNORA7.1-201ENST00000363750 139 ntBASIC1.67□□□□□ -2.14
RETP07949 SNORA25B-201ENST00000365507 128 ntBASIC1.67□□□□□ -2.14
RETP07949 Y_RNA.399-201ENST00000383955 105 ntBASIC1.67□□□□□ -2.14
RETP07949 RNU6-843P-201ENST00000384454 104 ntBASIC1.67□□□□□ -2.14
RETP07949 MIR186-201ENST00000384988 86 ntBASIC1.67□□□□□ -2.14
RETP07949 SNORA16.2-201ENST00000390991 127 ntBASIC1.67□□□□□ -2.14
RETP07949 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
RETP07949 HMGN2P39-201ENST00000398005 273 ntBASIC1.67□□□□□ -2.14
RETP07949 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.67□□□□□ -2.14
RETP07949 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.67□□□□□ -2.14
RETP07949 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RETP07949 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.67□□□□□ -2.14
RETP07949 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.67□□□□□ -2.14
RETP07949 PRPS1P1-201ENST00000445305 876 ntBASIC1.67□□□□□ -2.14
RETP07949 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.67□□□□□ -2.14
RETP07949 RNU1-123P-201ENST00000458950 160 ntBASIC1.67□□□□□ -2.14
RETP07949 RNU6-261P-201ENST00000459506 102 ntBASIC1.67□□□□□ -2.14
RETP07949 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.67□□□□□ -2.14
RETP07949 AC019235.1-201ENST00000503847 207 ntBASIC1.67□□□□□ -2.14
RETP07949 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.67□□□□□ -2.14
RETP07949 ATP5EP1-201ENST00000510257 156 ntBASIC1.67□□□□□ -2.14
RETP07949 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.67□□□□□ -2.14
RETP07949 RNU2-69P-201ENST00000516061 100 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms