Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.74□□□□□ -2.13
TGFAP01135 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.74□□□□□ -2.13
TGFAP01135 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.74□□□□□ -2.13
TGFAP01135 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.74□□□□□ -2.13
TGFAP01135 MIR4424-201ENST00000585257 86 ntBASIC1.74□□□□□ -2.13
TGFAP01135 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.74□□□□□ -2.13
TGFAP01135 AC007684.1-201ENST00000609671 477 ntBASIC1.74□□□□□ -2.13
TGFAP01135 HULC.1-201ENST00000612720 240 ntBASIC1.74□□□□□ -2.13
TGFAP01135 AL354950.2-201ENST00000617939 290 ntBASIC1.74□□□□□ -2.13
TGFAP01135 AL450472.1-202ENST00000637286 180 ntBASIC1.74□□□□□ -2.13
TGFAP01135 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
TGFAP01135 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TGFAP01135 Y_RNA.1-201ENST00000352915 104 ntBASIC1.73□□□□□ -2.13
TGFAP01135 RNU6-661P-201ENST00000362409 107 ntBASIC1.73□□□□□ -2.13
TGFAP01135 SNORD114-6-201ENST00000364393 72 ntBASIC1.73□□□□□ -2.13
TGFAP01135 SNORA32.2-201ENST00000384049 122 ntBASIC1.73□□□□□ -2.13
TGFAP01135 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
TGFAP01135 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
TGFAP01135 RNU6-1158P-201ENST00000391167 107 ntBASIC1.73□□□□□ -2.13
TGFAP01135 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
TGFAP01135 RNA5SP100-201ENST00000410903 110 ntBASIC1.73□□□□□ -2.13
TGFAP01135 RNA5SP59-201ENST00000410922 110 ntBASIC1.73□□□□□ -2.13
TGFAP01135 AL030996.1-201ENST00000411430 235 ntBASIC1.73□□□□□ -2.13
TGFAP01135 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.73□□□□□ -2.13
TGFAP01135 AL603825.1-201ENST00000438481 80 ntBASIC1.73□□□□□ -2.13
TGFAP01135 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.73□□□□□ -2.13
TGFAP01135 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.73□□□□□ -2.13
TGFAP01135 AC108078.1-201ENST00000508073 725 ntBASIC1.73□□□□□ -2.13
TGFAP01135 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
TGFAP01135 SNORA14.1-201ENST00000516113 141 ntBASIC1.73□□□□□ -2.13
TGFAP01135 RNVU1-2-201ENST00000516326 135 ntBASIC1.73□□□□□ -2.13
TGFAP01135 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.73□□□□□ -2.13
TGFAP01135 HSBP1P1-201ENST00000555205 166 ntBASIC1.73□□□□□ -2.13
TGFAP01135 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.73□□□□□ -2.13
TGFAP01135 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.73□□□□□ -2.13
TGFAP01135 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.73□□□□□ -2.13
TGFAP01135 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TGFAP01135 MIRLET7G-201ENST00000362280 84 ntBASIC1.72□□□□□ -2.13
TGFAP01135 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TGFAP01135 U8.13-201ENST00000390842 128 ntBASIC1.72□□□□□ -2.13
TGFAP01135 RNA5SP219-201ENST00000390940 113 ntBASIC1.72□□□□□ -2.13
TGFAP01135 Y_RNA.582-201ENST00000391023 95 ntBASIC1.72□□□□□ -2.13
TGFAP01135 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
TGFAP01135 AC068050.1-201ENST00000394891 380 ntBASIC1.72□□□□□ -2.13
TGFAP01135 EIF1AXP1-201ENST00000419267 435 ntBASIC1.72□□□□□ -2.13
TGFAP01135 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.72□□□□□ -2.13
TGFAP01135 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.72□□□□□ -2.13
TGFAP01135 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.72□□□□□ -2.13
TGFAP01135 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.72□□□□□ -2.13
TGFAP01135 RNU6-1037P-201ENST00000459571 107 ntBASIC1.72□□□□□ -2.13
TGFAP01135 AC104564.1-201ENST00000493028 407 ntBASIC1.72□□□□□ -2.13
TGFAP01135 AC091133.4-201ENST00000511142 308 ntBASIC1.72□□□□□ -2.13
TGFAP01135 RNU6-189P-201ENST00000516120 101 ntBASIC1.72□□□□□ -2.13
TGFAP01135 SNORA40.12-201ENST00000516329 111 ntBASIC1.72□□□□□ -2.13
TGFAP01135 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.72□□□□□ -2.13
TGFAP01135 SUB1P4-201ENST00000566062 339 ntBASIC1.72□□□□□ -2.13
TGFAP01135 AC009994.1-201ENST00000606889 253 ntBASIC1.72□□□□□ -2.13
TGFAP01135 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.72□□□□□ -2.13
TGFAP01135 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.72□□□□□ -2.13
TGFAP01135 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
TGFAP01135 AC092881.1-201ENST00000638218 2733 ntBASIC1.72□□□□□ -2.13
TGFAP01135 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TGFAP01135 RNU1-76P-201ENST00000362903 159 ntBASIC1.71□□□□□ -2.14
TGFAP01135 SNORD31B-201ENST00000364977 69 ntBASIC1.71□□□□□ -2.14
TGFAP01135 CDK8P2-201ENST00000415020 547 ntBASIC1.71□□□□□ -2.14
TGFAP01135 AC012306.1-201ENST00000423267 114 ntBASIC1.71□□□□□ -2.14
TGFAP01135 HSPE1P21-201ENST00000438283 308 ntBASIC1.71□□□□□ -2.14
TGFAP01135 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.71□□□□□ -2.14
TGFAP01135 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
TGFAP01135 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
TGFAP01135 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.71□□□□□ -2.14
TGFAP01135 AC130509.1-201ENST00000464158 433 ntBASIC1.71□□□□□ -2.14
TGFAP01135 MTCO3P38-201ENST00000468910 766 ntBASIC1.71□□□□□ -2.14
TGFAP01135 AC010424.1-201ENST00000506336 297 ntBASIC1.71□□□□□ -2.14
TGFAP01135 CCDC34P1-201ENST00000507441 517 ntBASIC1.71□□□□□ -2.14
TGFAP01135 RNU5F-4P-201ENST00000516581 114 ntBASIC1.71□□□□□ -2.14
TGFAP01135 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.71□□□□□ -2.14
TGFAP01135 AC087241.2-201ENST00000535801 324 ntBASIC1.71□□□□□ -2.14
TGFAP01135 CBX3P4-201ENST00000538909 354 ntBASIC1.71□□□□□ -2.14
TGFAP01135 VN1R80P-201ENST00000597126 338 ntBASIC1.71□□□□□ -2.14
TGFAP01135 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
TGFAP01135 uc_338.20-201ENST00000621563 178 ntBASIC1.71□□□□□ -2.14
TGFAP01135 AL160394.1-201ENST00000624765 724 ntBASIC1.71□□□□□ -2.14
TGFAP01135 SNORA43.4-201ENST00000629559 138 ntBASIC1.71□□□□□ -2.14
TGFAP01135 ZNF720P1-201ENST00000562403 1939 ntBASIC1.71□□□□□ -2.14
TGFAP01135 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TGFAP01135 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
TGFAP01135 AP000568.1-201ENST00000282964 442 ntBASIC1.7□□□□□ -2.14
TGFAP01135 RNU6-378P-201ENST00000384324 107 ntBASIC1.7□□□□□ -2.14
TGFAP01135 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
TGFAP01135 MIR208B-201ENST00000401172 77 ntBASIC1.7□□□□□ -2.14
TGFAP01135 RNU4-55P-201ENST00000410731 137 ntBASIC1.7□□□□□ -2.14
TGFAP01135 RNU2-41P-201ENST00000410991 178 ntBASIC1.7□□□□□ -2.14
TGFAP01135 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.7□□□□□ -2.14
TGFAP01135 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
TGFAP01135 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.7□□□□□ -2.14
TGFAP01135 RPL23AP7-203ENST00000449021 469 ntBASIC1.7□□□□□ -2.14
TGFAP01135 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.7□□□□□ -2.14
TGFAP01135 ATP5EP1-201ENST00000510257 156 ntBASIC1.7□□□□□ -2.14
TGFAP01135 AC091874.1-201ENST00000511402 339 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms